Question: Haplotype Reconstruction And Gwas For Quantitative Traits In Plants
gravatar for kumar.vinod81
7.2 years ago by
New Delhi
kumar.vinod81280 wrote:

I want to use Haploview or any other tool for haplotyping and association of these haploblock with quantitative traits from plant. I am currently able to load files in Haploview to have LD blocks according to my need. I want ask, is it possible with Haploview to study GWAS of the LD blocks generated by Haploviews for quantitative traits in plants? Currently, I am able to load only data from one chromosome to view haploblocks, I want to load whole genome SNP data and then want to view haplotype blocks and let them test for GWAS for quantitative traits in plant. Is all these possible with haploview or any other tools available, as I am not finding any help on this, as my phenotypic data are quantitative from plant. Thanks,

gwas • 3.1k views
ADD COMMENTlink modified 6.3 years ago by Biostar ♦♦ 20 • written 7.2 years ago by kumar.vinod81280
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