Question: Draft Genomes From Metagenomics
2
1
Entering edit mode
8.7 years ago
countcorvus ▴ 10

I would try to assembly some genomes from metagenomic samples. Anyone have any suggestions?

Thanks.

metagenomics assembly • 2.2k views
ADD COMMENT
3
Entering edit mode
8.7 years ago
cts ★ 1.7k

If your question is 'can it be done', then the answer is a resounding yes! see the methods of Albersen et al 2013, Sharon et al 2013, Wrighton et al 2012, Tyson et al 2004 and many others.

ADD COMMENT
1
Entering edit mode
8.7 years ago
Andreas ★ 2.5k

Just to add one to cts's suggestions: if you feel adventurous, you can give (the unpublished) Sigma a try.

Andreas

ADD COMMENT
0
Entering edit mode

Looks interesting, thanks for the link!

ADD REPLY

Login before adding your answer.

Traffic: 871 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6