Question: Looking For Ngs Exome Or Genome Data From Siblings Of Consanguineous Parents
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gravatar for alexej.knaus
5.3 years ago by
alexej.knaus120
Berlin
alexej.knaus120 wrote:

Hi, BioStars

to test an assmumption I am looking for exome or genome NGS data from sinblings of consanguineous parents. The data would be used confidentially and anonymized. If you have such genetic data in a public database, know where to find it, or could provide it for my research purpose, I would be very thankful.

The format of the data does not matter, I will generate VCF files and have in-house pipelines in order to do so.

Thank you all!

exome genome ngs • 1.4k views
ADD COMMENTlink modified 5.3 years ago by JC7.7k • written 5.3 years ago by alexej.knaus120
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gravatar for JC
5.3 years ago by
JC7.7k
Mexico
JC7.7k wrote:

You can obtain some siblings information from Complete Genomics pedigree genomes: http://www.completegenomics.com/public-data/69-Genomes/

ADD COMMENTlink written 5.3 years ago by JC7.7k
0
gravatar for Sean Davis
5.3 years ago by
Sean Davis25k
National Institutes of Health, Bethesda, MD
Sean Davis25k wrote:

A quick search of dbGaP may be useful (but may not).

http://www.ncbi.nlm.nih.gov/gap/?term=consanguineous

ADD COMMENTlink written 5.3 years ago by Sean Davis25k
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