Question: Validating Predictions Of Small Insertions / Deletions
0
gravatar for Ron
3.9 years ago by
Ron690
United States
Ron690 wrote:

Hi,

I have vcf files with indels which I created using GATK's Unified Genotyper.Is there any tool to vaildate those predictions?

Thanks

gatk variant • 931 views
ADD COMMENTlink modified 3.9 years ago by Charles Warden4.9k • written 3.9 years ago by Ron690
3
gravatar for Charles Warden
3.9 years ago by
Charles Warden4.9k
Duarte, CA
Charles Warden4.9k wrote:

Sanger sequencing would be the standard validation technique.

ADD COMMENTlink written 3.9 years ago by Charles Warden4.9k

Agreed. The only decent way to validate is experimental, not in silica

ADD REPLYlink written 3.9 years ago by zam.iqbal.genome1.6k
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