How to create a subset from a Nanopore fast5 file?

Question

[shelkmike]

Imagine that I have a fast5 file created by MinION which contains information for 4000 reads. I have a list of titles for, say, 1000 reads, and I want to create a new fast5 file which contains information only for those 1000 reads. How to do this?
I will be grateful for possible help.

[GenoMax]

Looks like fast5_fetcher (LINK) will do what you need.

ONT also has an official API.

Answer 1

[WouterDeCoster]

You can use a script from the ont-fast5-api

[shelkmike]

Thank you, exactly what I needed