I am looking to make Hybrid assembly of a viral genome. I have got paired-end reads from Illumina and long reads from MinION from a viral sample. I tried Unicycler for making hybrid assembly but it is for bacterial genome assembly. Could anyone please suggest a pipeline for viral genome assembly. Also, please let me know a program for quality check and trimming for MinION data. I am trying LongQC, MinIONQC but I'm not sure if these are appropriate.