Hello, I need to run Spades, i have WGS 230 paired end fastq files. First, I want to merge my R1.fastq and R2.fastq files into merge_R1.fastq and merge_R2.fastq . Pls, let me know how can I merge using bbmerge tool.
bbmerge.sh in1=<read1> in2=<read2> out=<merged reads> outu1=<unmerged1> outu2=<unmerged2>
Only if they actually overlap. Like below