Processing proteomics data

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2.1 years ago

Natasha ▴ 40

In relevance to my research, I've been looking for proteomics data (control vs. diabetic) and I found a dataset in this article "Diabetes causes marked inhibition of mitochondrial metabolism in pancreatic β-cells" .

I am actually looking for the data that was used for creating figure 1. I checked the PRIDE dataset shared in the paper (https://www.ebi.ac.uk/pride/archive/projects/PXD012979) and I could find the raw files but I was not sure where to look for the processed data and how to generate figure 1 (added below). enter image description here

Could someone please help me with this? I am not sure how to get started with this.

mass spectrometry PRIDE proteomics glycolysis • 678 views

ADD COMMENT • link updated 2.1 years ago by Ram 43k • written 2.1 years ago by Natasha ▴ 40

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Cross-posted after a few days of inactivity here: https://bioinformatics.stackexchange.com/questions/18850/processing-proteomics-data

ADD REPLY • link 2.1 years ago by Ram 43k

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