Disease-specific SNPs. Any databases?

Question

[english.server]

Hi all!

Is there a database listing disease-wise SNPs?

Answer 1

[Kevin Blighe]

A first logical choice would be ClinVar, which, although not strictly related to 'disease' (how do we truly define what is and is not a disease?), does list genetic variants that are known to be associated with phenotypes, whether they be detrimental to the organism housing the variant or not. Please see: https://www.ncbi.nlm.nih.gov/clinvar/

Another is:

• NHGRI GWAS Catalog: https://www.ebi.ac.uk/gwas/

Kind regards,

Kevin