GEO query package error
0
0
Entering edit mode
2.0 years ago
iamsmor • 0

Hello everyone

I am using R version 4.1.2 (2021-11-01)

I tried install Geoquery package by

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("GEOquery")

I got this error

Warning in setGenericS3.default(name, export = exportGeneric, envir = envir,  :
  Renamed the preexisting function getMethods to getMethods.default, which was defined in environment R.oo.
Error in RccViolationException("Class names must begin with a letter: ",  : 
  "RccViolationException" function not found
Error: unable to load R code in package ‘R.oo’
Working stopped

And I tried install.packages("R.oo") and get same error as above I mentioned.

How I can overcome this problem. Thank you for any help?

R GEOquery RStudio • 1.2k views
ADD COMMENT
1
Entering edit mode

Try to restart R, and then repeat the installation of R.oo. If that does not help I would post at support.bioconductor.org as this is the Bioc support forum. Include your sessionInfo() to give details on your OS.

ADD REPLY
0
Entering edit mode

tthank you

ADD REPLY

Login before adding your answer.

Traffic: 1406 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6