Entering edit mode
21 months ago
116439372
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I am running into a problem when trying to run pilercr. I am attempting to run it using the basic mode of;
pilercr -in <sequence_file> -out <report_file>
This is my input;
pilercr -in myseq400000.fa -out myseq400000.pilercr.txt
And this is what runs;
pilercr v1.06
http://www.drive5.com/piler
Written by Robert C. Edgar
This software is donated to the public domain.
Please visit web site for requested citation.
0 s 2 Mb ( 0%) Reading sequences from myseq400000.fa
16 s 1605 Mb (160%) 100.00%
16 s 1605 Mb (160%) 262774 sequences, total length 1357402024 bases (1357 Mb)
*** FATAL ERROR *** Failed to find filter parameters
Aborted (core dumped)
I've tried manually inputting all the default parameters but it will still give the same fatal error. Has anyone encountered this before and know a solution?
Have you tried using a different/smaller file and/or a subset of myseq file?