Error while running GATK4 Mutect2 in Galaxy
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13 months ago
anasjamshed ▴ 120

I have one clown and one control sample of python molurus bivittatus. After alignment, I am trying to use GATK4 Mutect2 to joint variant calling: cl vs ctrl

But after executing I got this error:

A USER ERROR has occurred: Bad input: The given bam input has no sample names.

How can I solve it?

Mutect2 GATK4 • 588 views
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so how can i add read groups?

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