How to load count matrix of scRNAseq data from cel-seq2 (96 well plates) protocol into a Seurat object

Question

[ashkan]

I have count matrix scRNAseq data from cel-seq2 (96 well plates) protocol for few samples which are tab separated text files in which the rows are genes and the columns are cells from different wells in the plate. I have no experience of working with cel-seq2 which is different from 10X genomics. I found a tool with the same name from here:

https://github.com/yanailab/celseq2

but so far I did not manage to get it working. since I already have count matrix, is it possible to use Seurat R package for this data? if so, how can I load this data to a Seurat object

[Basti]

You can use CreateSeuratObject : https://www.rdocumentation.org/packages/Seurat/versions/3.0.1/topics/CreateSeuratObject