hello I'm trying to blast on Ubuntu. I downloaded blast DB, but it's too big, so I plan to use only the Insecta DB I need.
- blastdbcmd -db nr -entry_batch insecta.txt -outfmt "%f" -out nr_database_insecta.fasta -target_only -dbtype prot
- blastdbcmd -db nr -dbtype prot -taxid 50557 -out nr_insecta.fasta -entry all
I used the two commands above, but it doesn't work. Can anyone tell me what problem in here?