Cell ranger multi for demultiplexing FB files and GEX files
0
0
Entering edit mode
4 months ago
Shloka • 0

I have my feature csv file which is multiplexing capture, i have feature barcode fastq files, gex fastq files and i was trying to run cell-ranger multi but this error shows up (error] Deplex Error: No valid tags were identified during the initialization phase.

This can indicate corrupt or problematic data.) i do not know how to troubleshoot

cellranger • 395 views
ADD COMMENT
0
Entering edit mode

Demultiplexing is typically done using Illumina software? Have you done this already?: https://www.10xgenomics.com/support/software/cell-ranger/analysis/inputs/cr-direct-demultiplexing

ADD REPLY

Login before adding your answer.

Traffic: 1694 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6