Herald:The Biostar Herald for Tuesday, February 20, 2024
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The Biostar Herald publishes user submitted links of bioinformatics relevance. It aims to provide a summary of interesting and relevant information you may have missed. You too can submit links here.

This edition of the Herald was brought to you by contribution from Mensur Dlakic, Istvan Albert, and was edited by Istvan Albert,


Genomic data in the All of Us Research Program | Nature (www.nature.com)

he All of Us Research Program is a longitudinal cohort study aiming to enrol a diverse group of at least one million individuals across the USA to accelerate biomedical research and improve human health

All of Us identified more than 1 billion genetic variants, including more than 275 million previously unreported genetic variants, more than 3.9 million of which had coding consequences. Leveraging linkage between genomic data and the longitudinal electronic health record, we evaluated 3,724 genetic variants associated with 117 diseases and found high replication rates across both participants of European ancestry and participants of African ancestry.

submitted by: Istvan Albert


submitted by: Istvan Albert


Dictionary learning for integrative, multimodal and scalable single-cell analysis | Nature Biotechnology (www.nature.com)

Latest Seurat in action

submitted by: Mensur Dlakic


submitted by: Istvan Albert


A tale of two misassemblies | Ryan Wick’s bioinformatics blog (rrwick.github.io)

[...] we saw two interesting misassemblies that I describe here. Both cases occurred with ONT-only assemblies

submitted by: Istvan Albert


https://academic.oup.com/bioinformaticsadvances/advance-article/doi/10.1093/bioadv/vbae018/7602576

The software and ontology mappings can be obtained from: https://github.com/EBIvariation/CMAT

submitted by: Mensur Dlakic


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