Question: Looking For Tools To Find Non-Coding Rnas In Bacterial Rna-Seq Data
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6.3 years ago by
United States
biotech540 wrote:


I'm looking for tools to semi-automate finding non-coding RNAs in bacterial RNA-seq data. I've been able to find these or these tools, but I'm still quite lost. I've also seen this Biostar post.

The few papers I could find don't follow a common method.

Can anyone recommend me the best approach?

Thanks, Bernardo

rnaseq bacteria rna-seq • 1.9k views
ADD COMMENTlink modified 4.8 years ago by gufernandez1010 • written 6.3 years ago by biotech540
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4.8 years ago by
gufernandez1010 wrote:

Hi a nice software to do it is Rockhopper , allow work with different experimental condition maye you should complement with homology studied as RNA sctructure conservation and sequence homology.


ADD COMMENTlink written 4.8 years ago by gufernandez1010
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