How to construct gene networks from RNA-seq or ChIP-seq data

Question

[Annrosebright8]

Hi All

Can anybody suggest a good tutorial to learn how to construct gene networks form chip seq , rna seq data. I dont have experience in the area of bioinfomatics. I will be really glad if anyone can suggest the best way to learn these skills

Thanks in advance.

Ann

[Annrosebright8]

Thank you. I will definitly try that.

Answer 1

[Istvan Albert]

To construct a network you have to decide what each node represents and on the condition/rule that, when true, would connect two nodes.

Perhaps the best way to understand the process is to use a tool like Cytoscape, install it, read the manuals and learn what it does: See Creating Networks