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Finding the official list of genes from Geneontology(GO) gene sets
genesets annotation go rna-seq written 6 weeks ago by Gabriel • 50 • updated 8 days ago by Biostar ♦♦ 20
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How to retrieve all GO terms at level 2 from a list input
go written 5 months ago by oseias.rf.junior • 0 • updated 21 days ago by miles.thorburn • 80
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Where to find *full* GO gene annotation file?
enrichment gene ontology gaf go written 2.1 years ago by iamjli • 10 • updated 23 days ago by Biostar ♦♦ 20
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GO slimming to specific parent term
parent child slimming gene ontology go written 26 days ago by jmah • 10 • updated 25 days ago by Jean-Karim Heriche ♦ 20k
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Alternate of WEGO (Web Gene Ontology Annotation Plotting)
gene ontology go wego written 3.4 years ago by Rajesh Detroja • 60 • updated 4 weeks ago by y.wang • 0
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clusterProfiler::enrichGO() is getting very slow
R clusterprofiler go written 5 weeks ago by sangram_keshari • 210 • updated 5 weeks ago by jared.andrews07 • 2.9k
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Question about gene ontology data visualization
R gene ontology visualization rna-seq go written 6 weeks ago by soojinima • 10 • updated 6 weeks ago by Pietro • 90
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Go Partition Database or another like tool
gene ontology hierarchy go dag written 7 weeks ago by Vincent Laufer • 1.1k
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Options for labeling pathways with higher-order ontologies
pathways gene ontology kegg go biocarta written 7 weeks ago by Vincent Laufer • 1.1k
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What background to use for functional annotation analysis of RRBS DMR data?
annotation methylation rrbs go dmr written 5 months ago by alan.g.hudson • 0 • updated 9 weeks ago by gurbetkarahan • 0
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DESeq2 output and GO analysis
rna-seq go written 9 weeks ago by 2nelly • 170
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How To Get Gene List From Each Gene Ontology Term?
go written 6.2 years ago by Omid • 550 • updated 3 months ago by EagleEye ♦ 6.4k
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News: GeneSCF (Gene Enrichment Tool): Advice to users
genescf news kegg go annotation written 2.6 years ago by EagleEye ♦ 6.4k
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Visualisation of GO Terms
gene ontology topgo go written 3 months ago by miles.thorburn • 80
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Selecting the background for GO enrichment analysis (proteomics)
proteomics enrichment clusterprofiler go written 3 months ago by hesse.sebastian • 80 • updated 3 months ago by Jean-Karim Heriche ♦ 20k
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What is the best way to rank genes for GSEA?
gene ranking gsea go rna-seq written 4 months ago by Gabriel • 50 • updated 4 months ago by Pietro • 90
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Enrichment via simple Fishers exact: Combine or not?
enrichment fishers go statistics written 4 months ago by Biogeek • 350
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ClusterProfiler fails to find GO terms
rna-seq go clusterprofiler written 4 months ago by grant.hovhannisyan • 1.7k
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GO annotation file for hsa genes
database go rna-seq written 6 months ago by wsciekly.maciek • 0 • updated 5 months ago by geneontologyhelp • 20
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Query about gene ontology analysis in edgeR vs GSEA
edger go written 5 months ago by elizabethR • 70
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Error when running sma3s for proteome annotation
annotation proteome go sma3s written 5 months ago by l.souza • 70
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6 follow
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Normal to have high variability in Broad Institute's GSEA Output?
gsea go written 11 months ago by Kristin Muench • 450
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5 follow
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How To Extract Go Terms From A Given Kegg Id
biomart kegg go written 7.1 years ago by Rm ♦ 7.9k • updated 5 months ago by Shaurya Jauhari • 40
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GO Annotation of fasta sequences
annotation gene annotation go written 6 months ago by miles.thorburn • 80
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456
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5 follow
1
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Tool or package to make a plot of multiple species GO comparison
package gene ontology visualization tool go written 11 months ago by rice.researcher • 140 • updated 6 months ago by matz • 0
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fastq to fasta conversion
fasta fastq go written 17 months ago by monicasteffi • 10 • updated 6 months ago by swbarnes2 ♦ 6.2k
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Relation between GO terms of homologous genes in different organisms.
annotation functional-annotation go written 7 months ago by zuhaibzulfiqarahmed • 0
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Do the gene sets of parent terms contains the gene sets of child terms in go ontology?
go written 7 months ago by xidianbill • 10 • updated 7 months ago by EagleEye ♦ 6.4k
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bash & quickGO to download gene symbols of a GO term
annotations go bash written 9 months ago by Adrian Pelin • 2.3k • updated 8 months ago by EagleEye ♦ 6.4k
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Genes associated with GO term
gene go written 2.5 years ago by mforde84 • 1.2k • updated 8 months ago by Biostar ♦♦ 20
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