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Advantages of different methods to transfer GO annotations
annotation rna-seq go written 5 days ago by Rogerio Ribeiro • 30
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What could be a good strategy to describe GO enrichments for a pubblication?
go written 9 days ago by BiomedicalTissueIng • 20
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How to Interpret Author's Methods in this article?
go written 19 days ago by BiomedicalTissueIng • 20
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RNAseq GO enrichment analysis: GO organism .db
R rna-seq go written 22 days ago by Neuls • 0 • updated 22 days ago by e.rempel • 1000
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74
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issues with agrigo V2
go written 22 days ago by alonziso • 0
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How to retreive all the genes belonging to one GO term
R go written 4 weeks ago by Francois Piumi • 0 • updated 4 weeks ago by Pierre Lindenbaum ♦ 134k
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few genes were annotated to GO terms using online eggnog-mapper
eggnog-mapper kegg go written 5 weeks ago by zhangdengwei • 130
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plotting a dotplot with topGO output
dotplot topgo rna-seq go clusterprofiler written 4 months ago by rachid.boumlik • 40 • updated 5 weeks ago by Kevin Blighe ♦ 71k
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GO enrichment analysis in R on Solanum lycopersicum proteomics dataset
R geneontology uniprot go clusterprofiler written 6 weeks ago by Alb • 0
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GO and KEGG pathway analysis of lncRNA genes
pathway lncrna kegg go clusterprofiler written 7 weeks ago by basuanubhav • 10
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5 follow
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Clusterprofiler error: No gene can be mapped
R clusterprofiler go enrichment go rna-seq written 11 months ago by tianshenbio • 80 • updated 10 weeks ago by cpp.xj • 0
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topGO enrichment: Should the "Gene universe" also contain genes with no GO term?
enrichment topgo rna-seq go written 12 weeks ago by YOUSEUFS • 20
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TopGO results inconclusive
R topgo annotation go enrichment written 3 months ago by zebratown • 0
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I have few Differentially expressed miRNAs out of edgeR ?
enrichment analysis pathway analysis go mirnas written 2.9 years ago by Björn • 50 • updated 3 months ago by Kevin Blighe ♦ 71k
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gogadget use with non-model organism to visualize goseq results
gogadget go go enrichment rna-seq goseq written 3 months ago by arroyo.sr • 0
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How to resolve NAs when annotating a diff gene list with org.Hs.eg.db terms?
ontologies rna-seq go annotations written 4 months ago by TonyCN • 60 • updated 3 months ago by Biostar ♦♦ 20
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topGO on RNA-seq
rna-seq go written 3 months ago by ccstaats • 0 • updated 3 months ago by Biostar ♦♦ 20
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clusterProfiler gene list retrieval
kegg reactome clusterprofiler go ontology written 3 months ago by LacquerHed • 0
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GO annotations into GFF3
annotation go written 4 months ago by Ric • 330 • updated 4 months ago by JC ♦ 12k
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GO Term Analysis
R rna-seq go annotation written 4 months ago by pthom010 • 0
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8 follow
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News: GeneSCF (Gene Enrichment Tool): Advice to users
genescf news kegg go annotation written 4.1 years ago by EagleEye ♦ 6.8k
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for go enrichment analysis which tool do you recommend?
rna-seq go written 5 months ago by eridanus • 20 • updated 5 months ago by Hamid Ghaedi • 1.3k
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How to construct KEGG and GO visualization graph?
kegg go written 5 months ago by nelsonv2709 • 0 • updated 5 months ago by Leite • 1.1k
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GO enrichment analysis using a Text file with all the genes and GO ids associated for a non model organism
go written 5.7 years ago by joynathan2 • 20 • updated 5 months ago by Biostar ♦♦ 20
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155
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Non redundant ID associating with GO and Pathway
pathway alignment go written 6 months ago by Ric • 330
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Extract genes names from GOrilla output file
gene grep sed go awk written 6 months ago by rrapopor • 10 • updated 6 months ago by rpolicastro ♦ 4.1k
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GO based on NCBI annotation
genome enrichment gsea go written 6 months ago by Jautis • 300
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How do I get a list of all the GO terms (including children of children etc.) of a parent GO term
annotation go ontology written 6 months ago by lekenyon • 0 • updated 6 months ago by jared.andrews07 ♦ 8.7k
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R package for GO-BP enrichment analysis with c(symbol, log2foldchange, pvalue)
R rna-seq go written 6 months ago by choijamtsm • 50
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What would be the best strategy to merge the GO annotation from blast2go, InterProScan, and eggnog
interproscan go blast2go rna-seq eggnog written 8 months ago by tianshenbio • 80 • updated 6 months ago by Biostar ♦♦ 20
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