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How to determine specific gene sequence from NGS data
next-gen sequencing written 2 hours ago by missTique • 0
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40
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Where can I find a fasta file with RefSeq Select sequences?
gene assembly next-gen sequence refseq select written 11 hours ago by rjd254 • 0 • updated 9 hours ago by genomax ♦ 90k
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"MethylKit" package for WGBS data
next-gen sequencing written 1 day ago by shrinka.genetics • 0
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5 follow
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RNAseq example data
data next-gen rna-seq expression written 1 day ago by rakinitopo • 10 • updated 1 day ago by ATpoint ♦ 39k
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RNA seq result interpretation
next-gen rna-seq written 2.8 years ago by reena_gd • 0 • updated 1 day ago by Abhishek • 20
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90
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BWA-MEM - Improperly Paired Reads
genome gatk next-gen alignment bwa written 2 days ago by mglasena • 0 • updated 2 days ago by genomax ♦ 90k
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Merging BAM or VCF files, whats the difference?
vcf variant calling next-gen genotype deepvariant written 3 days ago by leonardo.rippel • 20
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83
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how to interpret a CNV scatter plot
genome next-gen sequencing written 4 days ago by sara_beygi87 • 0 • updated 3 days ago by Medhat ♦ 8.8k
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How to retrieve sequences of genes list at a time from a fasta file
next-gen written 5 days ago by evafinegan • 0
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7 follow
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Does anyone know/would be willing to give me a guide on how to do ChIP-Seq data analysis?
next-gen chip-seq written 5 days ago by orchard4 • 10
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Pipeline which take care of tumor-normal contamination to correlate VAF, CNA and mRNA expression (WGS, RNASeq)
cna next-gen whole genome sequencing rna-seq snv written 5 days ago by Thind • 70
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help to download Repbase repeatmasker
software error assembly next-gen written 5 days ago by ajitdake2013 • 0 • updated 5 days ago by h.mon ♦ 31k
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merging single cell and bulk sequencing data
R next-gen rna-seq sequencing written 6 days ago by pegah.taklifi • 0
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5 follow
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How to remove contamination from WGS fastq files
next-gen sequence written 6 days ago by williamsbrian5064 • 260 • updated 6 days ago by genomax ♦ 90k
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sorting a csv file with 3 columns
next-gen written 8 days ago by dimitrischat • 120 • updated 6 days ago by Jorge Amigo ♦ 12k
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how to caculate insulation score in .hic file?
next-gen hic written 4 months ago by liulinli17m • 0 • updated 7 days ago by caokai001 • 0
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DESeq2 analysis with high number of samples
next-gen deseq2 rna-seq written 7 days ago by Manoj • 80 • updated 7 days ago by RamRS ♦ 30k
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News: Online training - NGS analysis for gene regulation and epigenomics
next-gen epigenomics genome news chip-seq R written 7 days ago by carlopecoraro2 • 1.8k
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1
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Adapter trimming by Trimmomatic - Nextera Library
sequence illumina adapter next-gen written 7 days ago by mimi • 0 • updated 7 days ago by colindaven • 2.4k
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82
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1
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HiFi reads assembler
genome assembly next-gen written 9 days ago by walid.cbs • 0 • updated 8 days ago by tjduncan • 270
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How to submit the stop codon free complete mitochondrial genome sequence in Genbank/BankIt?
genome gene next-gen assembly written 8 days ago by nazninislamnif • 20
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Will it be fine if the benchmarking of an assembler/aligner is performed using a single chromosome of Human
genome assembly next-gen sequence alignment written 8 days ago by rohitsatyam102 • 190 • updated 8 days ago by JC ♦ 11k
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Job: Postdoctoral Fellow - Bioinformatics Genomics
genome human ipsc next-gen job sequencing written 9 days ago by ikarus97 • 0
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54
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How to be sure that the microbiome I obtained is sound?
assembly next-gen error alignment sequencing written 9 days ago by marongiu.luigi • 520
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342
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I get different ENSG IDs for the same MSTRG ID
assembly next-gen rna-seq alignment written 14 months ago by morteza.aslanzadeh • 10 • updated 9 days ago by kristoffer.vittingseerup • 3.4k
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Different number of introns, exons, transcripts across RNA-Seq samples
R next-gen rna-seq sequencing written 11 days ago by lakshmi9c • 0
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100
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Chia-pipe cannot find the module pigz
chia-pet next-gen chip-seq written 12 days ago by bioinfo89 • 40 • updated 12 days ago by RamRS ♦ 30k
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85
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NGS bam file reference-guided assembly
assembly next-gen alignment written 15 days ago by eitamarsaraf • 0 • updated 12 days ago by colindaven • 2.4k
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empty fastq files created by docker bcl2fastq2 v2.20 OSX
sequence assembly next-gen rna-seq written 13 days ago by akh22 • 40
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Finding different normalization approaches and choose which one is better
next-gen sequence rna-seq sequencing written 13 days ago by luckysardar171 • 0 • updated 13 days ago by RamRS ♦ 30k
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