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5
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views
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dxy (Nei 1987) calculation
alignment next-gen sequence snp written 4.1 years ago by modernsynthesis • 30 • updated 1 hour ago by beausoleilmo • 300
0
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0
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52
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0
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Job: Graph Genome R&D Engineer at Seven Bridges, US or UK
next-gen job graph c++ written 7 hours ago by amit.jain • 0
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0
answers
42
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0
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Literature for VCF filtering
next-gen wes snp written 13 hours ago by Martina • 20
3
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0
answers
59
views
0
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cuffdiff output table
assembly next-gen rna-seq R written 17 hours ago by Balatheskulter • 0 • updated 15 hours ago by zx8754 ♦ 9.0k
1
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53
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how to find the resources of practising the basic genome assembly
next-gen written 21 hours ago by t4192 • 10
0
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1
answer
705
views
1
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Different reference and variant allele in IonTorrent variantCaller
next-gen sequence sequencing written 2.9 years ago by ceruleanivy • 30 • updated 23 hours ago by Biostar ♦♦ 20
3
votes
1
answer
64
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1
answer
How do I change size of gene names displayed on plotHeatmap from scater R Package
gene R next-gen rna-seq written 1 day ago by gsr9999 • 120 • updated 1 day ago by jared.andrews07 ♦ 4.9k
0
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0
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46
views
0
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VCF quality indicators
variant calling next-gen wes snp normal-tumor written 1 day ago by Martina • 20
3
votes
1
answer
60
views
1
answer
BAM file output
genome tutorial next-gen written 1 day ago by akshay_m180367cs • 0
4
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2
answers
75
views
2
answers
MultiQC not generating ouput ?
next-gen rna-seq written 1 day ago by sunnykevin97 • 30 • updated 1 day ago by ATpoint ♦ 29k
0
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35
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0
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Adjusting the Fst values for different sample sizes
genome next-gen snp written 1 day ago by Siavash Salek Ardestani • 20
18
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7
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155
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9 follow
7
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How to rename multiple fastq files
next-gen written 3 days ago by ENK • 0 • updated 2 days ago by Karma • 270
0
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0
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44
views
0
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Getting genotype type counts in sliding windows across genome
genome sliding-window next-gen whole-genome written 3 days ago by David Minkley • 10
0
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0
answers
81
views
0
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Creating a GenomicsDBImport from the normal Mutect2 calls
exome sequencing next-gen written 5 days ago by supriya.awasthy • 0
0
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1
answer
54
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1
answer
GeneHancer Database download link
next-gen sequencing written 6 days ago by 9521ljh • 10 • updated 4 days ago by Biostar ♦♦ 20
0
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0
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49
views
0
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News: Training in Bioinformatic Analysis of Next Generation Sequencing Data@NIH
news next-gen biomedical genomics rna-seq written 4 days ago by AABI • 120
0
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0
answers
63
views
0
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Repli-g single cell artefacts
sequencing wga next-gen snp repli-g single cell written 5 days ago by Martina • 20
13
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3
answers
4.9k
views
3
answers
Adding An Extra Column To A Vcf File.
vcf format next-gen sequencing written 9.8 years ago by Pierre Lindenbaum ♦ 126k • updated 5 days ago by Biostar ♦♦ 20
0
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0
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55
views
0
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How to remove aligned sequnces?
alignment next-gen sequencing written 6 days ago by vishalchanda364 • 20
1
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0
answers
47
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0
answers
## Help needed to run Lumpy with pair end discordant reads
next-gen sequencing written 7 days ago by prameelaawale • 0 • updated 7 days ago by ATpoint ♦ 29k
3
votes
1
answer
69
views
1
answer
Running an alignment with merged paired end reads, can I use bowtie2 or bwa mem?
alignment next-gen sequence sequencing written 8 days ago by m.radz • 0 • updated 8 days ago by ATpoint ♦ 29k
0
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337
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0
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Job: Bioinformatics Scientist/Programmer, Clinical Cancer Genomics Laboratory at UCSF
next-gen job snp sequencing R rna-seq written 5 weeks ago by ccglucsf • 20
0
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0
answers
57
views
0
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Parameters for variant calling in genome of unknown ploidy
genome next-gen snp sequencing written 8 days ago by biadarola • 0
0
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0
answers
73
views
0
answers
Job: Target Discovery Genetics Project Leader at C4X Discovery - London Office
next-gen statistics job snp R mathematics written 8 days ago by justyna.kozlowska • 0
4
votes
1
answer
75
views
1
answer
Virsorter running error
next-gen sequencing written 8 days ago by vishalchanda364 • 20 • updated 8 days ago by onestop_data • 160
1
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2
answers
110
views
2
answers
Tool to check what alternate allele is dominant across samples per line of the VCF file.
wgs next-gen written 4 weeks ago by halo22 • 140 • updated 8 days ago by chrchang523 ♦ 6.5k
0
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0
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62
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0
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Confusing Picard HsMetrics ON_BAIT_VS_SELECTED for near=250 and near=0
sequencing next-gen picard hsmetrics written 9 days ago by Floydian_slip • 130
0
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0
answers
78
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0
answers
read group, fastq files, and multiple run ids
picard gatk fastq next-gen readgroups written 9 days ago by Cricket • 10
0
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0
answers
50
views
0
answers
Calling CNVs in exomes - CLAMMS
exome next-gen clamms cnvs sequencing written 9 days ago by kath.a.fawcett • 0
0
votes
1
answer
64
views
1
answer
samtools merge not working
alignment next-gen samtools sequencing written 9 days ago by Ric • 290 • updated 9 days ago by Pierre Lindenbaum ♦ 126k
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