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<prev • 3,292 results • page 1 of 110 • next >
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samtools mpileup error
software error assembly next-gen sequence written 1 day ago by teresayahu • 0
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109
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How to process degenerate base region (DBRs) in a ddRAD sequencing protocol (remove PCR duplicates)?
bioinformatics next-gen ddrad stacks dbr written 3 days ago by beausoleilmo • 140
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91
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1
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Narrow & Broad peaks from 'macs2 bdgdiff'
macs2 next-gen chip-seq peakcalling sequencing written 1 day ago by anupriyaverma1408 • 100 • updated 1 day ago by jared.andrews07 • 90
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3
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26k
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3
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Minor allele frequency calculation
next-gen snp written 2.9 years ago by Tark • 30 • updated 2 days ago by gpatil • 0
5
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2
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202
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what do the headers of the rMATS output files mean?
next-gen star mats alternative splicing written 3 months ago by atcggcta • 0 • updated 2 days ago by johannes.ptok • 50
6
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3
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187
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5 follow
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fpkm to tpm conversion
R next-gen written 4 days ago by sayamsmruti • 0
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107
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Trimmomatic-0.36 is generating empty files
genome software error next-gen written 2 days ago by madzayasodara • 0 • updated 2 days ago by genomax ♦ 33k
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1
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78
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1
answer
SolexaQA++ lengthsort - c output
next-gen sequencing written 3 days ago by gtho123 • 170 • updated 3 days ago by Brian Bushnell ♦ 14k
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2
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2
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Which version of UCSC annotation are used in TCGA RNASeqV2 isoforms expression data ?
genome assembly next-gen rna-seq annotation written 3.3 years ago by jack • 680 • updated 3 days ago by -_- • 470
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137
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1
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What cause the differences between genes annotations from different databases?
gene database next-gen written 3 days ago by magicpants • 20 • updated 3 days ago by Jean-Karim Heriche ♦ 13k
3
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1
answer
87
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1
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How to use GRCh38 as reference for Annotating the variants using Annovar?
vcf annovar next-gen written 3 days ago by Phoenix • 100 • updated 3 days ago by Kevin Blighe • 1.2k
1
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76
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Match reads from sam (first col) to fastq file and extract to a file
genome gene next-gen sequence sequencing written 3 days ago by pup-ccmb • 0
0
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1
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95
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1
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Normalisation using Input DNA & calling peaks [Chip-seq]
normalization next-gen macs2 chip-seq written 3 days ago by anupriyaverma1408 • 100
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1
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1
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why I got different number of peaks used differnt version reference of hexaploid wheat analyzing the chip-seq data
genome alignment next-gen chip-seq written 14 days ago by ellahappy • 0 • updated 3 days ago by colindaven • 280
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1
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111
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1
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Does anyone have the bait sequences for Agilent SureSelect Exomes V5 and V6?
next-gen sequence sequencing written 3 days ago by john.markham • 0 • updated 3 days ago by Vijay Lakhujani • 1.2k
0
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1
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122
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1
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Calculation of signal-to-noise ratio (SNR)
genome next-gen snr sequencing written 9 days ago by ram.mainali • 0 • updated 4 days ago by Kevin Blighe • 1.2k
1
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142
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Job: Bioinformatics Specialist at the Center for Personalized Diagnostics, University of Pennsylvania, Philadelphia, PA, USA
next-gen job bioinformatician written 4 days ago by faryabilab • 50 • updated 4 days ago by genomax ♦ 33k
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2
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2.5k
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2
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Sam To Soap Format Converter
next-gen sam conversion written 5.6 years ago by Casey Bergman ♦ 17k • updated 4 days ago by Biostar ♦♦ 20
1
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1
answer
94
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1
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Any suggestions to Multi_Hit bars?
next-gen written 4 days ago by skr2345+bio • 0 • updated 4 days ago by Kevin Blighe • 1.2k
3
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1
answer
121
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1
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Why genomic information shown in UCSC/Ensembl browser for a specific gene is different from it's bed file?
genome gene next-gen ensembl ucsc written 4 days ago by bioinf_data-analyst9449 • 0 • updated 4 days ago by genecats.ucsc • 340
2
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97
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Converting different annotation file formats (GTF/GFF/BED) to each other
next-gen rna-seq written 4 days ago by Javad • 0
0
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0
answers
103
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0
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Regarding K mer analysis
genome assembly next-gen sequence written 4 days ago by lakhwanideepika • 0 • updated 4 days ago by WouterDeCoster ♦ 21k
0
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1
answer
86
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1
answer
APTANI a tool for aptamer analysis
software error next-gen sequencing written 11 days ago by tallnuttphone • 0
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113
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0
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RNA-editing pipeline for miRNAs
next-gen rna-editing mirna-editing rna-seq written 5 days ago by sombrajo92 • 0
7
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1
answer
126
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1
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How to manipulate a gff or gtf file manually?
genome next-gen rna-seq written 5 days ago by Javad • 0 • updated 5 days ago by shoujun.gu • 220
1
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1
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140
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1
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Question: Normalization of read counts for Metagenomics data
genome R next-gen sequencing assembly written 5 days ago by phongphak.06 • 10 • updated 5 days ago by colindaven • 280
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Job: Graduate student (MS or Ph.D) research assistantships / fellowships in Bioinformatics / Computational Biology
bioinformatics degree next-gen sequence job written 7 days ago by rkaundal • 0
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1
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577
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1
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increase in SNP frequency towards the 3 end of reads
next-gen snp written 24 months ago by c.gubili • 0 • updated 7 days ago by Biostar ♦♦ 20
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1
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122
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1
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CNVkit for germline samples
cnvkit next-gen targetsequencing germline written 9 days ago by merella.stefania • 0 • updated 8 days ago by Eric T. • 1.8k
3
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125
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Tutorial: How to take input TCGA miRNA data in Limma R package for differential expression
R tutorial next-gen rna-seq written 8 days ago by skjobs1234 • 0
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