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4
votes
2
answers
593
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2
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any extra steps between using tophat and cufflinks
next-gen rna-seq myposts written 2.4 years ago by F • 3.0k • updated 41 minutes ago by Biostar ♦♦ 20
2
votes
0
answers
89
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5 follow
0
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Job: Bioinformatician job offer at Genome Biologics, Frankfurt, Germany
bioinformatic next-gen job rna-seq written 6 hours ago by Rahul Sharma • 550
0
votes
0
answers
48
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0
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Polyester RNA-seq simulation
next-gen rna-seq sequencing written 12 hours ago by k.kathirvel93 • 50
1
vote
2
answers
655
views
2
answers
List of known fusions
fusion next-gen ngs rna-seq written 18 months ago by Ron • 760 • updated 7 hours ago by pb.panigrahi86 • 0
2
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3
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1.1k
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3
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Visualize Gene Fusions
R fusion next-gen rna-seq written 21 months ago by Ron • 760 • updated 7 hours ago by pb.panigrahi86 • 0
5
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2
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864
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2
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why the same gene is located at different chromosomes ?
gene genome next-gen rna-seq written 23 months ago by winter_li • 40 • updated 10 hours ago by finswimmer ♦ 2.9k
1
vote
1
answer
101
views
1
answer
Do I need to test the repeatability and reproducibility of a fixed bioinformatics pipeline for SNV calling
next-gen snp sequencing written 16 hours ago by lzy • 0 • updated 11 hours ago by Nandini • 570
1
vote
1
answer
148
views
5 follow
1
answer
Is there a perfect WGS dataset?
next-gen sequence written 2 days ago by marongiu.luigi • 190 • updated 2 days ago by Pierre Lindenbaum ♦ 108k
0
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0
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108
views
0
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How to improve single-cells data ?
genome assembly next-gen sequence written 3 days ago by darbinator • 0
2
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2
answers
1.8k
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2
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Threshold over percentage identity in blastn
gene alignment next-gen blast written 2.2 years ago by Tony • 10 • updated 3 days ago by gb • 60
3
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0
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91
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0
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Job: Bioinformatics project manager for NGS center (Post-Doc) - Institute of Clinical Molecular Biology, Christian-Albrechts University, Kiel, Germany
next-gen job written 3 days ago by mphoeppner • 0 • updated 3 days ago by genomax ♦ 50k
6
votes
0
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143
views
7 follow
0
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Issue with reverting bam file back to fastq files
genome assembly next-gen alignment written 4 days ago by williamsbrian5064 • 80
7
votes
4
answers
122
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10 follow
4
answers
how to analyze synteny between 4 genomes. please suggest suitable tool
assembly next-gen rna-seq sequencing written 21 days ago by kaurjaimeet911 • 10 • updated 4 days ago by Kevin Blighe ♦ 22k
1
vote
0
answers
308
views
5 follow
0
answers
Error while downloading data from database[EGA]
next-gen sequencing written 3 months ago by banerjeeshayantan • 50 • updated 4 days ago by 29aprilkrutika • 0
1
vote
0
answers
154
views
0
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check relatedness of individuals
R next-gen genetics plink snp written 4 weeks ago by bha • 60 • updated 4 days ago by Biostar ♦♦ 20
4
votes
1
answer
95
views
1
answer
bcl2fastq report the whole sequences without trimming index and adaptor
next-gen sequencing written 4 days ago by sckinta • 420 • updated 4 days ago by drkennetz • 180
5
votes
1
answer
57
views
1
answer
Issue with Bcftools reheader
genome alignment next-gen sequencing written 5 days ago by williamsbrian5064 • 80 • updated 5 days ago by Pierre Lindenbaum ♦ 108k
1
vote
1
answer
70
views
1
answer
Best Software for analysis of Hi-C data
next-gen sequencing written 5 days ago by h.long • 0 • updated 5 days ago by Devon Ryan ♦ 81k
0
votes
2
answers
86
views
2
answers
GATK3 error message
software error next-gen written 5 days ago by shuksi1984 • 20 • updated 5 days ago by Devon Ryan ♦ 81k
2
votes
1
answer
66
views
1
answer
Sequence Length Distribution after trimmomatic
next-gen sequence written 5 days ago by marongiu.luigi • 190
0
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0
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78
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0
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Tutorial: Principal Component Analysis (PCA ON T-BIOINFO)
tutorial next-gen rna-seq written 5 days ago by elia.brodsky • 230
0
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0
answers
73
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0
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Tool: T-BioInfo - an intuitive interface for complex bioinformatics tasks
next-gen tool chip-seq snp alignment rna-seq written 5 days ago by elia.brodsky • 230
0
votes
0
answers
108
views
0
answers
Transcriptomics and gKaKs pipeline
gkaks next-gen rna-seq transcriptome written 9 weeks ago by mac123 • 0 • updated 6 days ago by Biostar ♦♦ 20
0
votes
1
answer
63
views
1
answer
how to make this plot for mutation in paired samples?
R next-gen written 6 days ago by jhamy1605 • 0 • updated 6 days ago by igor ♦ 6.2k
5
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0
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86
views
0
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News: 2-day WORKSHOP on SNAKEMAKE
news next-gen written 6 days ago by carlopecoraro2 • 710
10
votes
4
answers
129
views
8 follow
4
answers
database for reference genome
assembly next-gen snp alignment written 6 days ago by t.berragragui • 0 • updated 6 days ago by 5heikki ♦ 7.3k
21
votes
11
answers
6.7k
views
14 follow
11
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Downsampling dataset with more than 60 million reads
next-gen rna-seq written 3.8 years ago by mike • 60 • updated 6 days ago by haro • 220
1
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0
answers
68
views
0
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News: Data Visualization with Python
python news next-gen written 6 days ago by carlopecoraro2 • 710
0
votes
0
answers
44
views
0
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Using wig2array from iSeeRNA
genome next-gen rna-seq written 6 days ago by anu014 • 150
1
vote
0
answers
87
views
0
answers
sortsam (picard) error in identifyting samfile
software error next-gen written 6 days ago by shuksi1984 • 20
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