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<prev • 4,189 results • page 1 of 140 • next >
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Difference between DESEq2 and ANCOM for estimating biomarkers (which is preferrred?)
software error next-gen written 13 hours ago by eimanpharmacist • 0 • updated 3 hours ago by Charles Warden ♦ 5.2k
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39
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Problem with RNA seq library preparation
next-gen rna-seq written 6 hours ago by shubameenu • 0 • updated 6 hours ago by Devon Ryan ♦ 84k
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856
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reporting the best alignment(s) only in pairwise2
next-gen alignment sequencing written 3.3 years ago by sumithrasank75 • 90 • updated 9 hours ago by ingridaolendraite • 0
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6 follow
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Metagenomics - mothur
next-gen written 16 hours ago by twesigomwedavid • 0
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best practices to use GATK with PacBio
gatk next-gen sequence snp pacbio written 2.4 years ago by Medhat ♦ 7.7k • updated 15 hours ago by prasundutta87 • 200
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News: Course: eDNA Metabarcoding in Canada
R news next-gen sequencing written 16 hours ago by carlopecoraro2 • 760
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116
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a5 Miseq pipeline error
software error assembly next-gen written 21 days ago by ambrinaakbar • 10 • updated 20 hours ago by Biostar ♦♦ 20
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1
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42
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Trying to use meshclust in windows
next-gen sequencing written 1 day ago by anasofiamoreira94 • 30 • updated 1 day ago by genomax ♦ 55k
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design matrix for time point comparision [1 treatment] in time course RNA Seq - EdgeR
next-gen rna-seq edger limma written 2 days ago by thindmarsmission • 0 • updated 2 days ago by WouterDeCoster ♦ 32k
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What kind of systematic bias of sequencing data the following normalization procedure address?
normalization next-gen bias written 2.6 years ago by Dataman • 260 • updated 4 days ago by Ram ♦ 17k
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Internal memory allocator is full!
software error assembly next-gen minia written 2.6 years ago by cmckay • 0 • updated 4 days ago by Ram ♦ 17k
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Cutadapt 1.9.1 error
next-gen tool cutadapt written 2.6 years ago by vishweshwaransridhar • 0 • updated 4 days ago by Ram ♦ 17k
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556
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Removing reads from fastq file based on position
latest next-gen rna-seq sequencing written 2.6 years ago by rmf • 340 • updated 4 days ago by Ram ♦ 17k
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Can't sort gff file ordered by chromosome (ch1,chr2,chr3......chrX).
next-gen rna-seq bash written 2.6 years ago by unique379 • 50 • updated 4 days ago by Ram ♦ 17k
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Can RNA-Seq be Used to Predict Non-Synonymous Mutational Load in a Non-Matched Surgical Tumor Sample?
genome gene next-gen rna-seq sequencing written 2.6 years ago by G4G • 0 • updated 4 days ago by Ram ♦ 17k
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1
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Obtaining phased haplotype data
next-gen haplotype sequencing written 2.6 years ago by kshitijtayal • 30 • updated 4 days ago by Ram ♦ 17k
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85
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Popularity of ADAM format vs BAM/SAM format
genome alignment next-gen written 5 days ago by amansinha.sw • 0 • updated 5 days ago by Devon Ryan ♦ 84k
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Correlation Of Fpkm And Length Normalized Transcript Mapped Read Count
bedtools cufflinks next-gen written 6.1 years ago by johannes.helmuth • 110 • updated 6 days ago by Biostar ♦♦ 20
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WGCNA trait question
genome next-gen rna-seq written 6 days ago by joetaylor268 • 0
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64
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How to use Snakemake with tools which don't have clearly defined output options for files?
next-gen pipeline snakemake sequencing written 6 days ago by Artem Kiselev • 20 • updated 6 days ago by WouterDeCoster ♦ 32k
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194
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seqtk subseq command not pulling full fastq reads
next-gen sequencing written 26 days ago by kratnasiri • 0 • updated 6 days ago by Biostar ♦♦ 20
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1
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54
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What is the significance of this file in COSMIC database?
genome next-gen snp written 6 days ago by banerjeeshayantan • 70
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EdgeR analysis with different biological replicates numbers problem
next-gen rna-seq written 7 days ago by ahmad.azd • 0
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1
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98
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bwa mem -K 100000000
next-gen alignment written 7 days ago by gwotto • 0
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What type of File is this? groHMM tutorial input says bam but it doesn't look bam
gro-seq next-gen sequencing written 7 days ago by simonalsager • 0 • updated 7 days ago by Pierre Lindenbaum ♦ 112k
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How can i use combination of both -nct and -nt in GATK?
genome gatk forum next-gen written 7 days ago by mandecent.gupta • 0 • updated 7 days ago by Ram ♦ 17k
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128
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Discrepancy between Nextera PE illumina produced sequence vs Sanger sequence of same sample??!!
genome assembly next-gen gene sequencing written 8 days ago by zayed.saud • 0 • updated 8 days ago by swbarnes2 ♦ 4.0k
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146
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Motif location for enriched motif in HOMER
next-gen chip-seq written 22 days ago by prakash • 480 • updated 8 days ago by genomax ♦ 55k
3
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2
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617
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6 follow
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Error while downloading data from database[EGA]
next-gen sequencing written 6 months ago by banerjeeshayantan • 70 • updated 8 days ago by miaowzai • 70
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Uneven amount of total sequences across individuals in RAD-seq dataset
next-gen sequencing written 8 days ago by CaffeSospeso • 0
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