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Answer: cannot conda install macs3 on linux
Answer: cannot conda install macs3 on linux
Answer: cannot conda install macs3 on linux
Answer: Choosing the right pathways among gene set enrichment analysis results
Answer: Choosing the right pathways among gene set enrichment analysis results
Answer: Choosing the right pathways among gene set enrichment analysis results
A: Selecting Random Pairs From Fastq?
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Comment: cannot conda install macs3 on linux
by
QX
• 0
Hi @atpoint thank for suggestion and advice, I will try!
Answer: VG view and VG chunk failed when using SequenceTubeMap
by
gforg34
▴ 20
Hey everyone, I wanted to thank you all for your immediate responses and insights. You're absolutely right about the misleading title, and…
Comment: coding and non-coding region of the viral genome
by
Ghada
• 0
Thanks for the explanation. I have already provided a code in a previous post. https://www.biostars.org/p/9595734/ In this post, my co…
Comment: How to Split FASTQ File by UMI Indices into Multiple Files
by
i.sudbery
19k
Reaper works on barcodes in the sequence, not in the header. I don't know if any tool that can do this out of the box. Might need to be a…
Comment: How to Split FASTQ File by UMI Indices into Multiple Files
by
GenoMax
142k
Can you show an example? It may be best to start with original data (if you moved the UMI to header) and use `reaper` ([**LINK**][1]), whi…
Comment: Set the same Y scale for different plots
by
Ghada
• 0
Thanks for the help :)
Comment: How to Split FASTQ File by UMI Indices into Multiple Files
by
LDT
▴ 340
thank you @genomax! they are in the header
Answer: cannot conda install macs3 on linux
by
ATpoint
83k
I suggest you use the `mamba` package manager. Mamba is (for the end user) conda, just better and faster. For installation, see https://ma…
Answer: NCBI vs Ensembl - Ortholog genes Information
by
tdmurphy
▴ 190
I believe the issue you're seeing may stem from the annotation sets more than differences in orthology methods (although both can certainly…
Answer: Chromosomal distribution of the trancscripts count
by
ATpoint
83k
If you have an Ensembl ID or any other canonical transcript name then I would simply load a GTF that matches your annotations, e.g. into R …
Comment: Set the same Y scale for different plots
by
ATpoint
83k
Try to learn, sort it out. Posting just an error is "do my work for me". Please.
Comment: How to Split FASTQ File by UMI Indices into Multiple Files
by
GenoMax
142k
You left out a critical bit of info. Where are these UMI currently? Inside sequences, in fastq headers? Show examples if possible.
Comment: Alternatives RAST annotation
by
GenoMax
142k
`prokka` is generally recommended/used for bacterial genome annotations: https://github.com/tseemann/prokka
Comment: Set the same Y scale for different plots
by
Ghada
• 0
Error in seq.default(min, max, by = by) : 'from' must be a finite number In addition: Warning messages: 1: In scale_y_log10(lim…
Comment: Chromosomal distribution of the trancscripts count
by
GenoMax
142k
Post example ID and also information about what organism these are from.
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