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questions
2
votes
1
reply
570
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how to bring in the cells in a gate from openCyto into the CATALYST pipeline (flow cytometry)
CATALYST
flow
cytometry
openCyto
ggcyto
15 months ago by
msn
▴ 130
0
votes
2
replies
805
views
Is there a way to test or say if one gene signature is better than another for predicting a phenotype?
stats
RNA-seq
gene-signature
updated 13 months ago by
Ram
43k • written 16 months ago by
msn
▴ 130
5
votes
5
replies
1.3k
views
How do I get separate ADT / CITE-seq fastq's from single SRA / BAM files? (originally generated from cellranger)
cellranger
scRNA
SRA
CITE-Seq
sra-tools
updated 17 months ago by
GenoMax
142k • written 19 months ago by
msn
▴ 130
5
votes
4
replies
709
views
Should I remove these cells? (scRNA 10x 5')
qualitycontrol
scRNA
Seurat
QC
18 months ago by
msn
▴ 130
3
votes
5
replies
1.3k
views
NextGen Sequencing Folks, what do you keep as your raw backup? BCL's or FASTQ's? Both?
next-gen-sequencing
backups
data-storage
updated 4 weeks ago by
Ram
43k • written 2.2 years ago by
msn
▴ 130
2
votes
9
replies
2.1k
views
MAGeCK pipeline doesnt find my controls. What am I doing wrong?
knockout
screen
Python
CRISPR
MAGeCK
R
2.2 years ago by
msn
▴ 130
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