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16
votes
33
replies
11k
views
9 follow
Back-filling missing genotypes in merged VCF
vcf
updated 2.9 years ago by 166k • written 11.0 years ago by ★ 1.1k
3
votes
1
reply
6.1k
views
Comment: C: CNV analysis from exome data (heterozygous vs homozygous)
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 1.1k
1
vote
1
reply
4.6k
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Comment: C: Variant Callers for deep sequencing
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 1.1k
0
votes
0
replies
12k
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Answer: A: Is it worth getting a Masters in Bioinformatics, financially?
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 1.1k
3
votes
0
replies
3.2k
views
Answer: A: gene set enrichment in an exome cohort study
updated 5.8 years ago by 45k • written 11.4 years ago by ★ 1.1k
0
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1
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4.5k
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Comment: C: Getting Population Specific Allele Frequency For Illumina Genotyping Data
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
0
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0
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6.6k
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Comment: C: More than one transcript per protein in Uniprot
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
0
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1
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6.6k
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Answer: A: More than one transcript per protein in Uniprot
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
2
votes
0
replies
3.1k
views
Answer: A: GWAS using 1kg or other database as "controls"?
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
0
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1
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3.1k
views
Comment: C: GWAS using 1kg or other database as "controls"?
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
1
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1
reply
3.2k
views
Comment: C: PLINK 1.90 alpha
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
1
vote
1
reply
3.9k
views
Comment: C: Ideas or advise for data visualization that shows genotype and phenotpye relatio
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
4
votes
0
replies
9.3k
views
Answer: A: Is there anyone who was a pure biologist?
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
2
votes
0
replies
3.7k
views
Answer: A: functional analysis of intronic and neargene SNPs
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
4
votes
1
reply
12k
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Answer: A: How to identify Gene IDs ?
updated 5.8 years ago by 45k • written 11.5 years ago by ★ 1.1k
1
vote
0
replies
4.3k
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Answer: A: What is a repetitive region?
updated 5.9 years ago by 45k • written 11.5 years ago by ★ 1.1k
3
votes
1
reply
3.7k
views
Comment: C: What's the correct way to withdraw a published database/server ?
updated 5.9 years ago by 45k • written 11.6 years ago by ★ 1.1k
5
votes
4
replies
4.3k
views
QC Sequence Data from VCF
qc vcf sequencing
updated 3.8 years ago by 45k • written 11.3 years ago by ★ 1.1k
7
votes
0
replies
5.1k
views
Answer: A: Variant Allele Frequency from Ion Torrent data
10.0 years ago by Katie D'Aco ★ 1.1k
1
vote
1
reply
5.3k
views
Comment: Comment: For the general public seeking advice from this community
updated 3.1 years ago by 45k • written 10.1 years ago by ★ 1.1k
5
votes
1
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5.3k
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Answer: Answer: For the general public seeking advice from this community
updated 3.1 years ago by 45k • written 10.1 years ago by ★ 1.1k
1
vote
0
replies
3.7k
views
Answer: Answer: HLA-DRB1 variant name description
updated 3.1 years ago by 45k • written 10.1 years ago by ★ 1.1k
1
vote
0
replies
9.3k
views
Answer: Answer: Large-scale open-source bioinformatics datasets
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 1.1k
1
vote
0
replies
12k
views
Answer: Answer: Intersect multiple bed and keep all fields
updated 3.0 years ago by 45k • written 10.3 years ago by ★ 1.1k
0
votes
1
reply
4.5k
views
Comment: C: Getting Population Specific Allele Frequency For Illumina Genotyping Data
10.6 years ago by Katie D'Aco ★ 1.1k
1
vote
1
reply
4.4k
views
Answer: Answer: How to draw the distribution of mutation like this?
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 1.1k
0
votes
0
replies
3.1k
views
Answer: Answer: 1000 Genome Project and ESP for indel or frameshift
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 1.1k
1
vote
1
reply
7.6k
views
Comment: Comment: Mission Impossible: you have 1 minute to analyze the Ebola Genome
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 1.1k
1
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0
replies
2.5k
views
Answer: Answer: How many of the human reference sequence alleles are derived alleles?
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 1.1k
1
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1
reply
11k
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Comment: C: Back-filling missing genotypes in merged VCF
11.0 years ago by Katie D'Aco ★ 1.1k
0
votes
1
reply
5.0k
views
Comment: Comment: What bioinformatics tools/software do not get enough recognition?
updated 3.8 years ago by 45k • written 11.0 years ago by ★ 1.1k
2
votes
0
replies
2.2k
views
Answer: Answer: universally heterozygous "SNP" in geuvadis VCF?
updated 4.6 years ago by 45k • written 11.0 years ago by ★ 1.1k
1
vote
0
replies
4.3k
views
Comment: C: Public Disease Exomes (VCF)
11.0 years ago by Katie D'Aco ★ 1.1k
0
votes
0
replies
3.3k
views
Comment: Comment: combining sequencing variants
updated 3.8 years ago by 45k • written 11.2 years ago by ★ 1.1k
3
votes
1
reply
3.3k
views
Answer: Answer: combining sequencing variants
updated 3.8 years ago by 45k • written 11.2 years ago by ★ 1.1k
4
votes
1
reply
3.8k
views
Answer: A: Question about dbSNP rs #s
11.2 years ago by Katie D'Aco ★ 1.1k
1
vote
1
reply
5.7k
views
Comment: C: Template-specific primers design
11.2 years ago by Katie D'Aco ★ 1.1k
0
votes
1
reply
5.7k
views
Comment: C: Template-specific primers design
11.2 years ago by Katie D'Aco ★ 1.1k
0
votes
1
reply
9.1k
views
Comment: C: Pre-computed list of genes in LD with a SNP with r2 from 1000Genomes / hg19
11.2 years ago by Katie D'Aco ★ 1.1k
1
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1
reply
9.1k
views
Answer: Answer: Pre-computed list of genes in LD with a SNP with r2 from 1000Genomes / hg19
updated 3.9 years ago by 45k • written 11.2 years ago by ★ 1.1k
0
votes
1
reply
2.5k
views
Comment: Comment: WES data - first exon
updated 3.9 years ago by 45k • written 11.2 years ago by ★ 1.1k
0
votes
0
replies
8.9k
views
Comment: C: Immune repertoire sequencing community
11.2 years ago by Katie D'Aco ★ 1.1k
0
votes
1
reply
8.9k
views
Comment: C: Immune repertoire sequencing community
11.2 years ago by Katie D'Aco ★ 1.1k
0
votes
1
reply
4.5k
views
Comment: C: Burden test interpretation
11.2 years ago by Katie D'Aco ★ 1.1k
0
votes
1
reply
4.5k
views
Comment: C: Burden test interpretation
11.2 years ago by Katie D'Aco ★ 1.1k
3
votes
0
replies
4.3k
views
Answer: A: exome cnv analysis of cases only
11.2 years ago by Katie D'Aco ★ 1.1k
1
vote
1
reply
4.7k
views
Answer: A: HLA typing analysis with plink or any other method?
11.2 years ago by Katie D'Aco ★ 1.1k
0
votes
1
reply
3.1k
views
Comment: C: Selection of family samples for exome sequencing study
11.3 years ago by Katie D'Aco ★ 1.1k
1
vote
0
replies
2.9k
views
Comment: C: Question about homozygous concept in a paper sentence
11.3 years ago by Katie D'Aco ★ 1.1k
4
votes
1
reply
3.1k
views
Answer: A: Selection of family samples for exome sequencing study
11.3 years ago by Katie D'Aco ★ 1.1k
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