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2
votes
8
replies
607
views
Blastn for all bacteria genomes; create the db
blast blastn
updated 3 months ago by 142k • written 3 months ago by ▴ 50
1
vote
4
replies
426
views
Blastn - matches with another species
blast blastn
3 months ago by davidmaimoun ▴ 50
0
votes
0
replies
186
views
Shovill running error 256
shovill
updated 4 months ago by 43k • written 4 months ago by ▴ 50
4
votes
8
replies
875
views
Parallelization of task according to the cpu capacity
parallelization cpu
4 months ago by davidmaimoun ▴ 50
4
votes
8
replies
1.2k
views
Docker: Pass reads file form host to container
docker
5 months ago by davidmaimoun ▴ 50
3
votes
9
replies
2.1k
views
Nextflow - Wait for process ending to call the next one without output
nextflow
updated 6 months ago by ▴ 10 • written 10 months ago by ▴ 50
0
votes
4
replies
939
views
Average Coverage after Assembly (Spades)
coverage average assembly
updated 7 months ago by 20k • written 21 months ago by ▴ 50
0
votes
2
replies
464
views
Chewbbaca - explanation of the output
chewbbaca
9 months ago by davidmaimoun ▴ 50
3
votes
6
replies
1.5k
views
Find Pathogenic Variants
vcf variant-calling
13 months ago by davidmaimoun ▴ 50
0
votes
0
replies
324
views
Fetching schemes from pubMLST
Fetching pubMLST schemes cgMLST scheme
21 months ago by davidmaimoun ▴ 50
16
votes
10
replies
4.1k
views
Nextflow- cannot run bash script from Docker
script bash nextflow from docker
updated 22 months ago by 6.4k • written 22 months ago by ▴ 50
2
votes
5
replies
951
views
How can I estimate how many ressources needed before running a script?
available ressources cpu cores
22 months ago by davidmaimoun ▴ 50
0
votes
0
replies
312
views
POST sequences to pubMLST API
pubmlst restful api
22 months ago by davidmaimoun ▴ 50
3
votes
6
replies
927
views
Determine my species from Isolates assemblies
blast
updated 17 months ago by 43k • written 22 months ago by ▴ 50
9
votes
14
replies
2.3k
views
6 follow
Downloading a huge amount of Fastq files
fastq
updated 14 months ago by 43k • written 23 months ago by ▴ 50
4
votes
6
replies
962
views
COBS Indexing genomes - understand the output
indexing cobs genomes COBS
23 months ago by davidmaimoun ▴ 50
6
votes
15
replies
1.6k
views
The Best Cloud Solution For Genomics
cloud data-sharing genomics workflow
updated 22 months ago by 43k • written 23 months ago by ▴ 50
0
votes
3
replies
657
views
Build A Spanning Tree From Several Strains
strains wgmlst compare tree spanning
2.1 years ago by davidmaimoun ▴ 50
3
votes
5
replies
1.0k
views
Allele Calling with chewBBaCA
wgmlst cgmlst mlst chewbbaca allele calling
updated 2.1 years ago by ▴ 230 • written 2.1 years ago by ▴ 50
8
votes
4
replies
1.9k
views
Build Phylogenetic Tree from SNPs
SNPs Tree Build Phylogenetic msa
2.1 years ago by davidmaimoun ▴ 50
20 results • Page 1 of 1
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