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Comment: C: Is there a limit to the p-value & q-value for cuffdiff gene_exp.diff?
updated 5.8 years ago by 45k • written 9.7 years ago by ▴ 60
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1
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21k
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Comment: C: edgeR: Correct pipeline for DE analysis with multiple conditions and batches
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 60
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1
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21k
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Comment: C: edgeR: Correct pipeline for DE analysis with multiple conditions and batches
updated 5.8 years ago by 45k • written 9.8 years ago by ▴ 60
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1
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23k
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Comment: C: Current state-of-the-art for RNA-Seq gene / transcript expression quantification
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 60
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Comment: C: Differential expression in edgeR with cuffdiff count output
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 60
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Comment: C: how to add a pseduo gene into a GTF file?
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 60
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Comment: C: how to add a pseduo gene into a GTF file?
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 60
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5.9k
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Comment: C: how to add a pseduo gene into a GTF file?
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 60
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9.2k
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Comment: C: Tophat: transcriptome building from GTF
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 60
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1
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9.2k
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Comment: C: Tophat: transcriptome building from GTF
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 60
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1
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9.2k
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Comment: C: Tophat: transcriptome building from GTF
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 60
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1
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9.2k
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Answer: A: Tophat: transcriptome building from GTF
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 60
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1
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9.2k
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Comment: C: Tophat: transcriptome building from GTF
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 60
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1
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9.2k
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Comment: C: Tophat: transcriptome building from GTF
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 60
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8.2k
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Comment: C: Trying To Extract Blast Results Into Xml Outfile From Larger Blast Xml File
updated 6.0 years ago by 45k • written 10.3 years ago by ▴ 60
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2.0k
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News: 4th Annual Viral Genomics & Bioinformatics Training Course (20-24 August 2018)
next-gen virus genomics course
updated 2.5 years ago by 45k • written 7.8 years ago by ▴ 60
1
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8
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5.9k
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how to add a pseduo gene into a GTF file?
RNA-Seq gtf genome
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 60
1
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0
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4.6k
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Comment: C: metaViC: Virus metagenomics pipeline for unknown host or in absence of a host ge
9.2 years ago by super ▴ 60
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9.0k
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Answer: A: Error For End Coordinate When Running Cuffdiff
9.5 years ago by super ▴ 60
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1
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1.9k
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htseq-count error RNAME == '*' although flag bit &0x0004 cleared"
RNA-Seq next-gen
9.5 years ago by super ▴ 60
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1
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23k
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Comment: C: Current state-of-the-art for RNA-Seq gene / transcript expression quantification
9.5 years ago by super ▴ 60
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0
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23k
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Comment: C: Current state-of-the-art for RNA-Seq gene / transcript expression quantification
9.6 years ago by super ▴ 60
1
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1
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2.4k
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gffread cannot get the gene symbol name for each transcript
RNA-Seq cufflinks genome transcriptome
9.6 years ago by super ▴ 60
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2.4k
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Answer: A: gffread cannot get the gene symbol name for each transcript
9.6 years ago by super ▴ 60
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6.5k
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Answer: A: Should adapters for RNASeq be removed before alignment?
9.6 years ago by super ▴ 60
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4.6k
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Answer: A: Cummerbund Returns 0 Sample
9.7 years ago by super ▴ 60
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1
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7.6k
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Comment: C: About The Priority Of Trimming
9.7 years ago by super ▴ 60
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1
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7.6k
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Comment: C: About The Priority Of Trimming
9.7 years ago by super ▴ 60
0
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1
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4.2k
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DESeq2 error in DESeqDataSetFromMatrix and SummarizedExperiment !
RNA-Seq
updated 3.3 years ago by 45k • written 9.8 years ago by ▴ 60
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1
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21k
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Comment: Comment: Normalizing Rna-Seq Data Using Ercc Spike-In
updated 3.2 years ago by 45k • written 10.1 years ago by ▴ 60
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0
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2.9k
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Comment: Comment: Gene ID conversion and Pathway analysis after mosquito blast
updated 4.6 years ago by 45k • written 11.0 years ago by ▴ 60
3
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2
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2.9k
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Gene ID conversion and Pathway analysis after mosquito blast
blast RNA-Seq gene genome
updated 4.6 years ago by 45k • written 11.1 years ago by ▴ 60
4
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13
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6.8k
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How to get the expression level of specific gene without annotation in RNA-Seq?
software-error RNA-Seq
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
0
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0
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6.8k
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Comment: Comment: How to get the expression level of specific gene without annotation in RNA-Seq?
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
0
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0
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6.8k
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Comment: Comment: How to get the expression level of specific gene without annotation in RNA-Seq?
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
0
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0
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6.8k
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Comment: Comment: How to get the expression level of specific gene without annotation in RNA-Seq?
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
1
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0
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12k
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Answer: Answer: How can I find the official gene ID correspond to the CUFF ID in cufflinks outpu
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
0
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0
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6.8k
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Comment: Comment: How to get the expression level of specific gene without annotation in RNA-Seq?
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
0
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0
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6.8k
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Comment: Comment: How to get the expression level of specific gene without annotation in RNA-Seq?
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
0
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1
reply
6.8k
views
Comment: Comment: How to get the expression level of specific gene without annotation in RNA-Seq?
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
0
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1
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6.8k
views
Comment: Comment: How to get the expression level of specific gene without annotation in RNA-Seq?
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 60
1
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0
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35k
views
Answer: Answer: Star Or Tophat?
updated 4.6 years ago by 45k • written 11.5 years ago by ▴ 60
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