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Comment: Comment: restricting number of hits for blastn execution format
updated 2.1 years ago by 43k • written 9.3 years ago by ▴ 730
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7.0k
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Answer: Answer: blastn execution error, the correct command line format
updated 2.1 years ago by 43k • written 9.3 years ago by ▴ 730
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2.3k
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Comment: Comment: GATB - Bloom filter for k-mers
updated 2.1 years ago by 43k • written 9.3 years ago by ▴ 730
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2.3k
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Answer: Answer: GATB - Bloom filter for k-mers
updated 2.1 years ago by 43k • written 9.3 years ago by ▴ 730
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1
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2.6k
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Answer: Answer: Is there any free ultra-fast resource for doing blast?
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 730
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3.0k
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Comment: Comment: minia assembler - counting kmers 'gatb::core::system::Exception'
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 730
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Comment: Comment: minia assembler - counting kmers 'gatb::core::system::Exception'
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 730
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2.5k
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Tool: All-in-one NCBI / EBI / Amazon BLAST workstation
ngklast blast
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 730
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8.5k
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Comment: C: _uint128_t’ was not declared in this scope
9.5 years ago by edrezen ▴ 730
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8.5k
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Answer: Answer: _uint128_t’ was not declared in this scope
updated 2.3 years ago by 43k • written 9.5 years ago by ▴ 730
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24k
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Comment: Comment: Blast E Value Calculation
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 730
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1
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9.5k
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Answer: Answer: remove fasta file heading
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 730
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5.1k
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Comment: C: Fast kmer reverse complement code using bit tricks
9.6 years ago by edrezen ▴ 730
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Answer: A: k-mer tools - probability based models
9.8 years ago by edrezen ▴ 730
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2.9k
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Answer: Answer: Process tabular BLAST output
updated 2.5 years ago by 43k • written 9.8 years ago by ▴ 730
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Comment: Comment: Why are we still using Bam files? And not Cram, HDF5 or improved Bam files?
updated 3.1 years ago by 43k • written 9.8 years ago by ▴ 730
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4.5k
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Answer: A: Assigning subject to query based on coverage from blast output file
9.8 years ago by edrezen ▴ 730
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3.0k
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Comment: Comment: Exact match in blastn
updated 2.5 years ago by 43k • written 9.8 years ago by ▴ 730
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3.0k
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Answer: Answer: Exact match in blastn
updated 2.5 years ago by 43k • written 9.8 years ago by ▴ 730
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Answer: Answer: How to extract the longest orf?
updated 2.5 years ago by 43k • written 9.8 years ago by ▴ 730
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8.3k
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Comment: C: Not having root access sucks; installing software without root privileges
9.9 years ago by edrezen ▴ 730
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6.9k
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Answer: Answer: K-mers using JEllyfish
updated 2.5 years ago by 43k • written 9.9 years ago by ▴ 730
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Tool: KLAST, a Blast-like tool for fast sequence similarity searches: free academic version
klast
updated 10 months ago by 43k • written 9.9 years ago by ▴ 730
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