Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
1.3k
views
Comment: Comment: Obtain equivalent variant ids (chr-pos-ref-alt) for GRCh37 and GRCh38
3.4 years ago by iraun 6.2k
1
vote
0
replies
962
views
Answer: Answer: bcftools error on freebayes vcfs
3.4 years ago by iraun 6.2k
0
votes
0
replies
750
views
Comment: Comment: CNV loss and high expression
3.4 years ago by iraun 6.2k
1
vote
0
replies
1.6k
views
Comment: Comment: Difference between commands [bowtie2, samtools]
3.4 years ago by iraun 6.2k
2
votes
2
replies
1.6k
views
Answer: Answer: Difference between commands [bowtie2, samtools]
3.4 years ago by iraun 6.2k
1
vote
0
replies
2.9k
views
Comment: Comment: For loop in R
3.4 years ago by iraun 6.2k
1
vote
1
reply
3.9k
views
Comment: Comment: building snpEff database
3.4 years ago by iraun 6.2k
2
votes
1
reply
1.2k
views
Answer: Answer: featureCounts results has many psedugenes(ENSG***) together with genes
3.4 years ago by iraun 6.2k
0
votes
1
reply
1.9k
views
Answer: Answer: bcftools consensus overlapped variant
3.4 years ago by iraun 6.2k
1
vote
1
reply
2.0k
views
Comment: Comment: Accessing COSMIC database via Python script
3.4 years ago by iraun 6.2k
1
vote
1
reply
1.2k
views
Comment: Comment: featureCounts results has many psedugenes(ENSG***) together with genes
3.4 years ago by iraun 6.2k
0
votes
2
replies
760
views
Comment: Comment: Extract 3'utr sequences from annotation file
3.4 years ago by iraun 6.2k
0
votes
0
replies
1.0k
views
Comment: Comment: RSEM Prepare Reference - transcriptome instead of genome reference?
3.4 years ago by iraun 6.2k
0
votes
1
reply
1.0k
views
Comment: Comment: RSEM Prepare Reference - transcriptome instead of genome reference?
3.4 years ago by iraun 6.2k
1
vote
0
replies
1.3k
views
Comment: Comment: technical replicates
3.4 years ago by iraun 6.2k
0
votes
1
reply
1.2k
views
Comment: Comment: RNA-seq alignment in UNIX
3.4 years ago by iraun 6.2k
0
votes
1
reply
978
views
Comment: Comment: Addning RNA-seq data to machine learning
3.4 years ago by iraun 6.2k
1
vote
1
reply
2.4k
views
Comment: Comment: Exon-level counts with featureCounts
3.4 years ago by iraun 6.2k
1
vote
1
reply
1.0k
views
Comment: Comment: phasing VCF
3.4 years ago by iraun 6.2k
3
votes
1
reply
1.2k
views
Answer: Answer: How to label genes passing the p-value and fold change cut-offs in EnhancedVolca
3.4 years ago by iraun 6.2k
2
votes
1
reply
2.2k
views
Comment: Comment: DeSeq2 analysis of samples with no replicates?
3.4 years ago by iraun 6.2k
1
vote
2
replies
5.2k
views
Answer: Answer: all variables in design formula must be columns in colData
3.5 years ago by iraun 6.2k
0
votes
0
replies
2.2k
views
Comment: Comment: Retrieve only protein coding esnsemble gene ids and gene symbols
3.5 years ago by iraun 6.2k
1
vote
1
reply
1.3k
views
Comment: Comment: Issue when trying to extract sequences from a genome using bed coordinates and s
3.5 years ago by iraun 6.2k
0
votes
0
replies
1.6k
views
Comment: Comment: extract ALL mapped paired-end reads from BAM file
3.5 years ago by iraun 6.2k
3
votes
1
reply
5.4k
views
Comment: Comment: make a BED file with exons only
3.5 years ago by iraun 6.2k
0
votes
1
reply
1.3k
views
Answer: Answer: Issue when trying to extract sequences from a genome using bed coordinates and s
3.5 years ago by iraun 6.2k
0
votes
1
reply
5.4k
views
Comment: Comment: make a BED file with exons only
3.5 years ago by iraun 6.2k
2
votes
0
replies
674
views
Answer: Answer: Intronic gVCF
3.5 years ago by iraun 6.2k
0
votes
0
replies
2.9k
views
Comment: Comment: Visualization of Frameshift mutations in IGV using Bam files
3.5 years ago by iraun 6.2k
0
votes
0
replies
1.1k
views
Answer: Answer: Tumor cell percentage detection tool
3.5 years ago by iraun 6.2k
0
votes
1
reply
2.9k
views
Comment: Comment: Visualization of Frameshift mutations in IGV using Bam files
3.5 years ago by iraun 6.2k
0
votes
0
replies
1.1k
views
Comment: Comment: Read depth per base DNA seq
3.5 years ago by iraun 6.2k
2
votes
1
reply
2.9k
views
Answer: Answer: Visualization of Frameshift mutations in IGV using Bam files
3.5 years ago by iraun 6.2k
0
votes
0
replies
1.9k
views
Answer: Answer: Why some variants doesn't have RS number?
3.5 years ago by iraun 6.2k
1
vote
0
replies
30k
views
Comment: Comment: Gene Set Enrichment Analysis
3.5 years ago by iraun 6.2k
2
votes
1
reply
3.4k
views
Comment: Comment: htseq-count error
3.5 years ago by iraun 6.2k
0
votes
1
reply
1.5k
views
Comment: Comment: Fasta_reader.pm Trinity fails
3.5 years ago by iraun 6.2k
3
votes
2
replies
3.4k
views
Answer: Answer: htseq-count error
3.5 years ago by iraun 6.2k
0
votes
0
replies
863
views
Comment: Comment: separate meta-population data from VCF
3.5 years ago by iraun 6.2k
2
votes
0
replies
871
views
Answer: Answer: Spades command for single cultivator
3.5 years ago by iraun 6.2k
0
votes
0
replies
1.2k
views
Comment: Comment: What is recurrent somatic copy-number alterations?
3.5 years ago by iraun 6.2k
2
votes
0
replies
6.3k
views
Comment: Comment: DP meaning in VCF files
3.5 years ago by iraun 6.2k
0
votes
0
replies
1.4k
views
Comment: Comment: How exactly count numbers are calculated with tximport
3.5 years ago by iraun 6.2k
0
votes
0
replies
784
views
Comment: Comment: Where to find and extract coordinates of common CNV and repetitive regions in hu
3.5 years ago by iraun 6.2k
0
votes
0
replies
771
views
Comment: Comment: Filtering genes in scRNA-seq
3.5 years ago by iraun 6.2k
0
votes
1
reply
863
views
Comment: Comment: separate meta-population data from VCF
3.5 years ago by iraun 6.2k
0
votes
1
reply
3.2k
views
Answer: Answer: How to perform Allele balance on a VCF file from GATK?
3.5 years ago by iraun 6.2k
1
vote
1
reply
2.6k
views
Comment: Comment: "transcript reads were aligned to the RefSeq transcriptome (downloaded March 201
3.5 years ago by iraun 6.2k
0
votes
0
replies
1.4k
views
Comment: Comment: Bash loop one liner
3.5 years ago by iraun 6.2k
679 results • Page 6 of 14
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6