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127
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How to plot coverage and depth statistics of a bam file
bam coverage depth next-gen-sequencing
updated 23 months ago by ▴ 40 • written 11.3 years ago by ▴ 390
0
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1
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17k
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Comment: Comment: Online/remote/distance learning/ - partime/fulltime - PhD, Bioinformatics in USA
4.4 years ago by kay ▴ 390
3
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0
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1.8k
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Answer: A: TCGA data on cloud
7.0 years ago by kay ▴ 390
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0
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4.0k
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Comment: C: How to apply GenVisR Bioconductor package on VCF file
7.2 years ago by kay ▴ 390
0
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2
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4.0k
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Answer: A: How to apply GenVisR Bioconductor package on VCF file
7.6 years ago by kay ▴ 390
0
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6
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4.0k
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How to apply GenVisR Bioconductor package on VCF file
R bioconductor vcf
7.6 years ago by kay ▴ 390
0
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6
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4.1k
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identification of viral gene from fastq or BAM file
RNA-Seq
updated 3.8 years ago by 45k • written 11.1 years ago by ▴ 390
0
votes
4
replies
3.3k
views
Is it possible to add all possible VCF annotations in one command using ANNOVAR ?
annovar
updated 9.1 years ago by 20 • written 9.2 years ago by ▴ 390
8
votes
4
replies
17k
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error installing samtools on ubuntu
samtools
updated 9.2 years ago by 5.0k • written 9.2 years ago by ▴ 390
2
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0
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17k
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Comment: A: error installing samtools on ubuntu
9.2 years ago by kay ▴ 390
0
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1
reply
3.3k
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Comment: C: Is it possible to add all possible VCF annotations in one command using ANNOVAR
9.2 years ago by kay ▴ 390
1
vote
1
reply
3.5k
views
Snpsift to filter a number of genes
SNP variant annotation snpsift snpeff
9.5 years ago by kay ▴ 390
1
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0
replies
2.2k
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Looking for publicly available VCF files on cardiology
vcf
updated 3.1 years ago by 45k • written 9.7 years ago by ▴ 390
0
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1
reply
3.0k
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How to find annotation file version from CDF file
SNP affymetrix
updated 3.1 years ago by 45k • written 9.8 years ago by ▴ 390
0
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0
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4.1k
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Comment: C: identification of viral gene from fastq or BAM file
11.1 years ago by kay ▴ 390
0
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1
reply
4.1k
views
Comment: Comment: identification of viral gene from fastq or BAM file
updated 3.8 years ago by 45k • written 11.1 years ago by ▴ 390
1
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2
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3.0k
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Does anyone know how the Y axis (% of reference) for the "coverage distribution" graph of the BAMStats program is calculated ?
next-gen bam RNA-Seq
updated 3.9 years ago by 45k • written 11.2 years ago by ▴ 390
0
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0
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119k
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Comment: Comment: How to plot coverage and depth statistics of a bam file
updated 3.9 years ago by 45k • written 11.3 years ago by ▴ 390
0
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1
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119k
views
Comment: A: How to plot coverage and depth statistics of a bam file
11.3 years ago by kay ▴ 390
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