Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
1.3k
views
Comment: Comment: The BUSCO assessment of the MAKER annotation results shows a low completeness
6 days ago by Juke34 8.9k
0
votes
2
replies
1.3k
views
Comment: Comment: The BUSCO assessment of the MAKER annotation results shows a low completeness
6 days ago by Juke34 8.9k
0
votes
0
replies
291
views
Comment: Comment: Introducing SnakeMake.IO – Enhancing Snakemake Workflow Management
10 days ago by Juke34 8.9k
1
vote
1
reply
326
views
Answer: Answer: How to filter and keep longest isoform per gene in gff3 file ?
updated 24 days ago by 148k • written 24 days ago by 8.9k
0
votes
0
replies
722
views
Comment: Comment: Create a fasta and gtf file
4 weeks ago by Juke34 8.9k
2
votes
1
reply
722
views
Answer: Answer: Create a fasta and gtf file
4 weeks ago by Juke34 8.9k
0
votes
0
replies
602
views
Comment: Comment: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
5 weeks ago by Juke34 8.9k
11
votes
2
replies
602
views
Tutorial: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
conda Anaconda license
5 weeks ago by Juke34 8.9k
0
votes
0
replies
552
views
Comment: Comment: genome annotation and GFF file formation
8 weeks ago by Juke34 8.9k
0
votes
2
replies
784
views
Answer: Answer: How can I extract 3'UTR of bacteria (Pseudomonas aeruginosa) without using R?
9 weeks ago by Juke34 8.9k
2
votes
1
reply
345
views
Answer: Answer: Need help with AUGUSTUS and AGAT for gene prediction and feature extraction, res
9 weeks ago by Juke34 8.9k
0
votes
0
replies
548
views
Comment: Comment: Awesome awesomeness bioinformatics
12 weeks ago by Juke34 8.9k
1
vote
1
reply
548
views
Comment: Comment: Awesome awesomeness bioinformatics
12 weeks ago by Juke34 8.9k
10
votes
4
replies
548
views
Forum: Awesome awesomeness bioinformatics
bioinformatics Awesome
12 weeks ago by Juke34 8.9k
0
votes
0
replies
2.2k
views
Comment: Comment: GTF file
3 months ago by Juke34 8.9k
1
vote
0
replies
2.2k
views
Answer: Answer: GTF file
3 months ago by Juke34 8.9k
1
vote
1
reply
3.8k
views
Comment: Comment: Status of maker annotation
3 months ago by Juke34 8.9k
0
votes
1
reply
2.2k
views
Comment: Comment: GTF file
3 months ago by Juke34 8.9k
1
vote
0
replies
2.2k
views
Comment: Comment: GTF file
3 months ago by Juke34 8.9k
0
votes
1
reply
2.2k
views
Comment: Comment: GTF file
3 months ago by Juke34 8.9k
0
votes
0
replies
4.8k
views
Comment: Comment: How to annotate eukaryotic genome
4 months ago by Juke34 8.9k
0
votes
0
replies
677
views
Comment: Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
7 months ago by Juke34 8.9k
1
vote
1
reply
677
views
Comment: Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
7 months ago by Juke34 8.9k
3
votes
0
replies
646
views
Answer: Answer: Assume "yes" as the answer to any prompts with bioconda
7 months ago by Juke34 8.9k
0
votes
1
reply
576
views
Comment: Comment: Why are gene models from JGI non-sense when using AGAT to to extract proteins?
8 months ago by Juke34 8.9k
0
votes
0
replies
885
views
Answer: Answer: Genbank Bacteriophage Genome Submission - Internal stop codons in CDS sequences
8 months ago by Juke34 8.9k
3
votes
0
replies
549
views
Answer: Answer: why there is an asterisk symbol at the end of each proteins sequences offasta fi
8 months ago by Juke34 8.9k
1
vote
1
reply
11k
views
Comment: Comment: Create de novo repeat library
9 months ago by Juke34 8.9k
1
vote
0
replies
1.2k
views
Answer: Answer: Intersect gene IDs list and GFF3 to get the annotation.
9 months ago by Juke34 8.9k
0
votes
0
replies
653
views
Answer: Answer: How can I get the sequences of the first 20nt of introns and the last 250nt of i
9 months ago by Juke34 8.9k
1
vote
0
replies
1.7k
views
Comment: Comment: Trying to wrap my head around Illumina paired end sequencing
11 months ago by Juke34 8.9k
0
votes
1
reply
945
views
Comment: Comment: Gemoma error with gff file
11 months ago by Juke34 8.9k
1
vote
0
replies
2.4k
views
Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
13 months ago by Juke34 8.9k
1
vote
1
reply
2.4k
views
Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
13 months ago by Juke34 8.9k
1
vote
1
reply
2.4k
views
Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
13 months ago by Juke34 8.9k
0
votes
1
reply
1.5k
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
14 months ago by Juke34 8.9k
0
votes
1
reply
1.5k
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
14 months ago by Juke34 8.9k
1
vote
1
reply
1.2k
views
Answer: Answer: Adapters finder
14 months ago by Juke34 8.9k
0
votes
0
replies
1.2k
views
Comment: Comment: Converting GFF to GTF
14 months ago by Juke34 8.9k
2
votes
1
reply
1.1k
views
Answer: Answer: Fastp
14 months ago by Juke34 8.9k
0
votes
1
reply
888
views
Comment: Comment: Samtools mpileup for RNA Editing levels generating empty output file
14 months ago by Juke34 8.9k
1
vote
0
replies
449
views
Comment: Comment: Luciferase T7 Control GTF file
14 months ago by Juke34 8.9k
0
votes
1
reply
1.8k
views
Comment: Comment: Getting the overlap between two GTF files
14 months ago by Juke34 8.9k
0
votes
1
reply
1.3k
views
Comment: Comment: how to identify uniq genes between two gff files.
14 months ago by Juke34 8.9k
0
votes
1
reply
1.3k
views
Answer: Answer: how to identify uniq genes between two gff files.
14 months ago by Juke34 8.9k
1
vote
1
reply
1.3k
views
Answer: Answer: How to check RNAseq support for annotated genes?
14 months ago by Juke34 8.9k
1
vote
1
reply
2.4k
views
Answer: Answer: Assistance with Fungal Genome Annotation Using Maker and BLAST
14 months ago by Juke34 8.9k
2
votes
2
replies
4.3k
views
Answer: Answer: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
15 months ago by Juke34 8.9k
1
vote
1
reply
25k
views
Comment: Comment: Is there a tool that sorts gtf files?
15 months ago by Juke34 8.9k
1
vote
1
reply
6.6k
views
Answer: Answer: Convert bed12 to GFF
15 months ago by Juke34 8.9k
985 results • Page 1 of 20
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6