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Comment: Comment: replace gene names in gff file
7 weeks ago by Juke34 9.3k
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676
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Answer: Answer: Mitochondrial annotation tool for algae
4 months ago by Juke34 9.3k
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942
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Comment: Comment: Why little difference in RNAseq alignment when flipping forward and reverse stra
4 months ago by Juke34 9.3k
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1.5k
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Answer: Answer: Learning Nextflow
4 months ago by Juke34 9.3k
3
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1
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1.4k
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Answer: Answer: Editing and Adding to a GTF file
6 months ago by Juke34 9.3k
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691
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Comment: Comment: Reannotation of complete bacterial genome sequence
7 months ago by Juke34 9.3k
7
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5
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1.5k
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Tool: AliNe (Alignment in Nextflow)
nextflow alignment
7 months ago by Juke34 9.3k
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0
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1.5k
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Answer: Answer: AliNe (Alignment in Nextflow)
7 months ago by Juke34 9.3k
15
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3
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3.1k
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Tutorial: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
conda Anaconda license
7 months ago by Juke34 9.3k
1
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0
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3.1k
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Answer: Answer: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
7 months ago by Juke34 9.3k
0
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0
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1.5k
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Comment: Comment: AliNe (Alignment in Nextflow)
8 months ago by Juke34 9.3k
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1
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1.5k
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Comment: Comment: AliNe (Alignment in Nextflow)
8 months ago by Juke34 9.3k
3
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2
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4.6k
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Answer: Answer: Preventing Conda/Mamba from accessing Anaconda repos when institution blocks the
9 months ago by Juke34 9.3k
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0
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14k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
9 months ago by Juke34 9.3k
1
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1
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14k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
9 months ago by Juke34 9.3k
1
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1
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14k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
9 months ago by Juke34 9.3k
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0
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1.9k
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Comment: Comment: How modified GTF file into a BED file with chromosome aware format?
10 months ago by Juke34 9.3k
1
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1
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3.3k
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Comment: Comment: The BUSCO assessment of the MAKER annotation results shows a low completeness
11 months ago by Juke34 9.3k
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2
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3.3k
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Comment: Comment: The BUSCO assessment of the MAKER annotation results shows a low completeness
11 months ago by Juke34 9.3k
0
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0
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854
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Comment: Comment: Introducing SnakeMake.IO – Enhancing Snakemake Workflow Management
11 months ago by Juke34 9.3k
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1
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1.4k
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Answer: Answer: How to filter and keep longest isoform per gene in gff3 file ?
updated 11 months ago by 154k • written 11 months ago by 9.3k
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0
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1.9k
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Comment: Comment: Create a fasta and gtf file
12 months ago by Juke34 9.3k
2
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1
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1.9k
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Answer: Answer: Create a fasta and gtf file
12 months ago by Juke34 9.3k
0
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0
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3.1k
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Comment: Comment: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
12 months ago by Juke34 9.3k
0
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0
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1.5k
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Comment: Comment: genome annotation and GFF file formation
13 months ago by Juke34 9.3k
0
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2
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1.7k
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Answer: Answer: How can I extract 3'UTR of bacteria (Pseudomonas aeruginosa) without using R?
13 months ago by Juke34 9.3k
2
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1
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1.0k
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Answer: Answer: Need help with AUGUSTUS and AGAT for gene prediction and feature extraction, res
13 months ago by Juke34 9.3k
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0
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1.9k
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Comment: Comment: Awesome awesomeness bioinformatics
13 months ago by Juke34 9.3k
1
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1
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1.9k
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Comment: Comment: Awesome awesomeness bioinformatics
13 months ago by Juke34 9.3k
10
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4
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1.9k
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Forum: Awesome awesomeness bioinformatics
bioinformatics Awesome
13 months ago by Juke34 9.3k
0
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0
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5.7k
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Comment: Comment: GTF file
14 months ago by Juke34 9.3k
1
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0
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5.7k
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Answer: Answer: GTF file
14 months ago by Juke34 9.3k
1
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1
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5.0k
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Comment: Comment: Status of maker annotation
14 months ago by Juke34 9.3k
0
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1
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5.7k
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Comment: Comment: GTF file
14 months ago by Juke34 9.3k
1
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0
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5.7k
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Comment: Comment: GTF file
14 months ago by Juke34 9.3k
0
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1
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5.7k
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Comment: Comment: GTF file
14 months ago by Juke34 9.3k
0
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0
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6.7k
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Comment: Comment: How to annotate eukaryotic genome
16 months ago by Juke34 9.3k
0
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0
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1.5k
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Comment: Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
18 months ago by Juke34 9.3k
1
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1
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1.5k
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Comment: Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
18 months ago by Juke34 9.3k
3
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0
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1.4k
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Answer: Answer: Assume "yes" as the answer to any prompts with bioconda
19 months ago by Juke34 9.3k
0
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1
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1.1k
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Comment: Comment: Why are gene models from JGI non-sense when using AGAT to to extract proteins?
19 months ago by Juke34 9.3k
0
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0
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2.0k
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Answer: Answer: Genbank Bacteriophage Genome Submission - Internal stop codons in CDS sequences
19 months ago by Juke34 9.3k
3
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0
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1.5k
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Answer: Answer: why there is an asterisk symbol at the end of each proteins sequences offasta fi
20 months ago by Juke34 9.3k
1
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1
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14k
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Comment: Comment: Create de novo repeat library
20 months ago by Juke34 9.3k
1
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0
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2.3k
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Answer: Answer: Intersect gene IDs list and GFF3 to get the annotation.
20 months ago by Juke34 9.3k
0
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0
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1.3k
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Answer: Answer: How can I get the sequences of the first 20nt of introns and the last 250nt of i
20 months ago by Juke34 9.3k
1
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0
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3.6k
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Comment: Comment: Trying to wrap my head around Illumina paired end sequencing
22 months ago by Juke34 9.3k
0
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1
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1.6k
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Comment: Comment: Gemoma error with gff file
22 months ago by Juke34 9.3k
1
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0
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4.1k
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Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
2.1 years ago by Juke34 9.3k
1
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1
reply
4.1k
views
Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
2.1 years ago by Juke34 9.3k
1,001 results • Page 1 of 21
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