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Comment: Comment: gtf2bed not converting to bed
2.7 years ago by Juke34 9.3k
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Comment: Comment: gtf2bed not converting to bed
2.7 years ago by Juke34 9.3k
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13k
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Comment: Comment: How can I easily remove overlapping transcripts, keeping only longest transcript
2.7 years ago by Juke34 9.3k
2
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0
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1.8k
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Answer: Answer: Error while converting GFF file to GTF using AGAT
2.7 years ago by Juke34 9.3k
1
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960
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Testing Evolutionary Hypothesis ( branch-sites )
Evolutionary ETE3 codeml
updated 2.7 years ago by ▴ 570 • written 2.7 years ago by 9.3k
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13k
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Comment: Comment: How can I easily remove overlapping transcripts, keeping only longest transcript
2.7 years ago by Juke34 9.3k
1
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1
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13k
views
Comment: Comment: How can I easily remove overlapping transcripts, keeping only longest transcript
2.7 years ago by Juke34 9.3k
1
vote
1
reply
13k
views
Comment: Comment: How can I easily remove overlapping transcripts, keeping only longest transcript
2.8 years ago by Juke34 9.3k
0
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1
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1.7k
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Comment: Comment: Alternatives to ProtExcluder in repeat annotation/MAKER?
2.8 years ago by Juke34 9.3k
1
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1.7k
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Comment: Comment: Alternatives to ProtExcluder in repeat annotation/MAKER?
2.8 years ago by Juke34 9.3k
0
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0
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6.2k
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Comment: Comment: Sort gff3 on chromosome, position and then featuretype (gene, mRNA, exon, CDS)
2.8 years ago by Juke34 9.3k
0
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1
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3.4k
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Comment: Comment: download a set of proteome from uniprot
2.8 years ago by Juke34 9.3k
2
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3
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3.4k
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download a set of proteome from uniprot
uniprot
updated 2.6 years ago by 45k • written 2.8 years ago by 9.3k
3
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1
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4.0k
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Answer: Answer: RNA Editing data from RNA-seq
2.8 years ago by Juke34 9.3k
2
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0
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4.0k
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Comment: Comment: RNA Editing data from RNA-seq
2.8 years ago by Juke34 9.3k
2
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0
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1.4k
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Answer: Answer: How to merge unique/non overlapping genes between 2 gene model GFF3 files?
2.8 years ago by Juke34 9.3k
0
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1
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4.0k
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Comment: Comment: RNA Editing data from RNA-seq
2.8 years ago by Juke34 9.3k
0
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0
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1.4k
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Answer: Answer: How to extract sequence in fasta format from micro RNA gff3 files (sRNAanno data
2.8 years ago by Juke34 9.3k
0
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0
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1.5k
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Comment: Comment: Combine different functional annotations
2.8 years ago by Juke34 9.3k
1
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1
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1.5k
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Comment: Comment: Combine different functional annotations
2.8 years ago by Juke34 9.3k
0
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1
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3.0k
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Comment: Comment: Error after installation of AGAT
2.8 years ago by Juke34 9.3k
0
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1
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3.0k
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Comment: Comment: Error after installation of AGAT
2.8 years ago by Juke34 9.3k
0
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0
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3.2k
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Comment: Comment: Adding functional annotation and meta-data of MAKER/BRAKER GFF
2.8 years ago by Juke34 9.3k
0
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0
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3.6k
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Comment: Comment: Wrong naming of transcript in gtf/gff3
2.8 years ago by Juke34 9.3k
0
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0
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15k
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Comment: Comment: How to get proteins from GFF file resulted from MAKER annotation
2.8 years ago by Juke34 9.3k
0
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1
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3.2k
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Comment: Comment: Adding functional annotation and meta-data of MAKER/BRAKER GFF
2.8 years ago by Juke34 9.3k
2
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3
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3.6k
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Answer: Answer: Wrong naming of transcript in gtf/gff3
2.9 years ago by Juke34 9.3k
0
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1
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1.3k
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Answer: Answer: How annotation files are generated?
2.9 years ago by Juke34 9.3k
2
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1
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3.2k
views
Answer: Answer: How to determine the encoding method of quality score in a fastaq file?
2.9 years ago by Juke34 9.3k
0
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0
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5.3k
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Comment: Comment: How to find rna strand direction before alignment?
2.9 years ago by Juke34 9.3k
0
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0
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5.3k
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Comment: Comment: How to find rna strand direction before alignment?
2.9 years ago by Juke34 9.3k
0
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0
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5.3k
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Comment: Comment: How to find rna strand direction before alignment?
2.9 years ago by Juke34 9.3k
1
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0
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5.3k
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Comment: Comment: How to find rna strand direction before alignment?
2.9 years ago by Juke34 9.3k
2
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1
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5.3k
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Answer: Answer: How to find rna strand direction before alignment?
2.9 years ago by Juke34 9.3k
1
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1
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14k
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Comment: Comment: Create de novo repeat library
2.9 years ago by Juke34 9.3k
0
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1
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2.7k
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Answer: Answer: RNA-SeQC: Failed to parse the GTF: Detected non-unique Exon ID
3.0 years ago by Juke34 9.3k
0
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1
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4.9k
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Comment: Comment: How to extract intron counts from total RNA Sequencing?
3.0 years ago by Juke34 9.3k
0
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0
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4.9k
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Comment: Comment: How to extract intron counts from total RNA Sequencing?
3.0 years ago by Juke34 9.3k
0
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2
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4.9k
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Comment: Comment: How to extract intron counts from total RNA Sequencing?
3.0 years ago by Juke34 9.3k
0
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1
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4.9k
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Comment: Comment: How to extract intron counts from total RNA Sequencing?
3.0 years ago by Juke34 9.3k
4
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1
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1.2k
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Answer: Answer: Convert gff to bed, including non coding elements
3.0 years ago by Juke34 9.3k
0
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0
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2.2k
views
Comment: Comment: StringTie error: Error: no valid ID found for GFF record
3.0 years ago by Juke34 9.3k
0
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0
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1.3k
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Comment: Comment: Extracting all the genes without introns for a species
3.0 years ago by Juke34 9.3k
0
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0
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10k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.1 years ago by Juke34 9.3k
0
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0
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10k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.1 years ago by Juke34 9.3k
14
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31
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10k
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6 follow
Tutorial: gene set filter/selection for training ab initio annotation tools
geneset genome gene abinitio
updated 2.7 years ago by 45k • written 6.2 years ago by 9.3k
2
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1
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1.6k
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Answer: Answer: question about gff to gtf conversion
3.1 years ago by Juke34 9.3k
0
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0
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10k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.1 years ago by Juke34 9.3k
0
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1
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1.7k
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Comment: Comment: AUGUSTUS error message: Segmentation fault (core dumped)
3.2 years ago by Juke34 9.3k
0
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1
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1.1k
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Comment: Comment: AUGUSTUS gene prediction using Zebrafish data as a reference specie.
3.2 years ago by Juke34 9.3k
1,001 results • Page 3 of 21
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