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2
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1.8k
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Comment: Comment: Pipeline version control system, pipeline storage
4.2 years ago by Juke34 9.3k
1
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1
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1.3k
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Answer: Answer: Convert gff3 (or .out file) in RepeatMasker into tbl format
4.2 years ago by Juke34 9.3k
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1
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2.9k
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Answer: Answer: SRA/ENA library layout is inconsistent with the data source
4.2 years ago by Juke34 9.3k
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0
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3.2k
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Comment: Comment: GRCh37 GFF filter transcript isoforms by RefSeq Select tag or longest
4.2 years ago by Juke34 9.3k
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1
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3.2k
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Comment: Comment: GRCh37 GFF filter transcript isoforms by RefSeq Select tag or longest
4.2 years ago by Juke34 9.3k
0
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2
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3.2k
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Answer: Answer: GRCh37 GFF filter transcript isoforms by RefSeq Select tag or longest
4.2 years ago by Juke34 9.3k
1
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1
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2.8k
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Answer: Answer: How to fix GTF files by adding specific strings into empty gene_id ""
4.2 years ago by Juke34 9.3k
0
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0
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2.2k
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Answer: Answer: How to split big .faa file into smaller .faa files
4.2 years ago by Juke34 9.3k
0
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1
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4.1k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
4.2 years ago by Juke34 9.3k
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0
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4.1k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
4.3 years ago by Juke34 9.3k
0
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0
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5.9k
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Comment: Comment: Error when trying to import GTF files using rtracklayer's import function
4.3 years ago by Juke34 9.3k
0
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2
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4.1k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
4.3 years ago by Juke34 9.3k
0
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0
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4.1k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
4.3 years ago by Juke34 9.3k
0
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1
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4.1k
views
Comment: Comment: How to trim a GFF3 file based on specific coordinates?
4.3 years ago by Juke34 9.3k
0
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1
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4.1k
views
Comment: Comment: How to trim a GFF3 file based on specific coordinates?
4.3 years ago by Juke34 9.3k
2
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2
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4.1k
views
Answer: Answer: How to trim a GFF3 file based on specific coordinates?
4.3 years ago by Juke34 9.3k
0
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0
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928
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Answer: Answer: How do I extract predicted genes from annotation from MAKER-P?
4.3 years ago by Juke34 9.3k
0
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0
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4.2k
views
Comment: Comment: Render Rmarkdown in nextflow
4.3 years ago by Juke34 9.3k
0
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0
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2.6k
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Answer: Answer: homebrew Vs bioconda
4.3 years ago by Juke34 9.3k
0
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1
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3.1k
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Comment: Comment: bcl-convert multithreading optiisation
4.3 years ago by Juke34 9.3k
2
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3
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3.1k
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bcl-convert multithreading optimisation
bcl-convert bcl2fastq threading
2.6 years ago by Juke34 9.3k
0
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1
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21k
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Answer: Answer: gff3 to CDS fasta
4.3 years ago by Juke34 9.3k
1
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1
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6.8k
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Comment: Comment: Adding Introns To Gff3 Format?
4.4 years ago by Juke34 9.3k
2
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0
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2.7k
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Answer: Answer: Weird characters in yeast reference gff3
4.4 years ago by Juke34 9.3k
1
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0
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10k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
4.4 years ago by Juke34 9.3k
0
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1
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10k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
4.4 years ago by Juke34 9.3k
0
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0
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10k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
4.4 years ago by Juke34 9.3k
0
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1
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10k
views
Comment: Comment: gene set filter/selection for training ab initio annotation tools
4.4 years ago by Juke34 9.3k
0
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0
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2.2k
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Comment: Comment: Using RefSeq gene annotation file to determine gene lengths
4.4 years ago by Juke34 9.3k
1
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0
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2.3k
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Comment: Comment: generating transcript to gene mapping with unhelpful GFF3 file
4.4 years ago by Juke34 9.3k
1
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1
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2.3k
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Comment: Comment: generating transcript to gene mapping with unhelpful GFF3 file
4.4 years ago by Juke34 9.3k
0
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0
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1.4k
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Comment: Comment: extract the ids and key values
4.4 years ago by Juke34 9.3k
0
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0
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1.8k
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Comment: Comment: How to remove repeated sequence region in Interproscan .gff3 with many ORFs?
4.4 years ago by Juke34 9.3k
0
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1
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2.0k
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Comment: Comment: To retrieve the transcript from gff file with the longest isoform
4.4 years ago by Juke34 9.3k
1
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0
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6.8k
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Comment: Comment: Problem with featureCounts using a GTF generated by me
4.4 years ago by Juke34 9.3k
0
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0
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5.6k
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Comment: Comment: how to get transcript.fasta from gff file
4.4 years ago by Juke34 9.3k
1
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0
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1.9k
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Tutorial: Slurm and parallelization
slurm
4.4 years ago by Juke34 9.3k
6
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12
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5.5k
views
Trim bam file reads to remove all nucleotide over a certain length
bam trimming
updated 4.4 years ago by 154k • written 4.4 years ago by 9.3k
0
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1
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5.5k
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Answer: Answer: Trim bam file reads to remove all nucleotide over a certain length
4.4 years ago by Juke34 9.3k
1
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0
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2.9k
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Answer: Answer: Trim bam file reads to the same length
4.4 years ago by Juke34 9.3k
0
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0
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5.5k
views
Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
4.4 years ago by Juke34 9.3k
0
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0
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5.5k
views
Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
4.4 years ago by Juke34 9.3k
1
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0
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5.5k
views
Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
4.4 years ago by Juke34 9.3k
0
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2
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5.5k
views
Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
4.4 years ago by Juke34 9.3k
0
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0
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2.9k
views
Comment: Comment: Trim bam file reads to the same length
4.4 years ago by Juke34 9.3k
0
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0
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1.1k
views
Comment: Comment: aligning reads against shorter region
4.4 years ago by Juke34 9.3k
1
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1
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5.4k
views
Answer: Answer: Extract transcript fasta using gff
4.4 years ago by Juke34 9.3k
1
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2
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1.1k
views
aligning reads against shorter region
alingment Bowtie2
4.4 years ago by Juke34 9.3k
2
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0
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19k
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Answer: Answer: How to trim Nanopore reads. Please suggest a tool.
4.4 years ago by Juke34 9.3k
0
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1
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1.3k
views
Answer: Answer: Subset gff with non-unique seqid
4.4 years ago by Juke34 9.3k
1,001 results • Page 6 of 21
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