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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
2.0 years ago by Vasu ▴ 810
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2.9k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
2.0 years ago by Vasu ▴ 810
0
votes
1
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2.9k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
2.0 years ago by Vasu ▴ 810
0
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1
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2.9k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
2.0 years ago by Vasu ▴ 810
0
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0
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2.9k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
2.0 years ago by Vasu ▴ 810
0
votes
2
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2.9k
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Comment: Comment: How to extract specific region from multiple bam files and merge the outputs int
2.0 years ago by Vasu ▴ 810
3
votes
14
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2.9k
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How to extract specific region from multiple bam files and merge the outputs into single bam?
bam rna-seq
updated 2.0 years ago by 154k • written 2.0 years ago by ▴ 810
0
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1
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2.5k
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Comment: Comment: How to remove uncharacterized chromosomes from GTF file?
2.8 years ago by Vasu ▴ 810
3
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3
replies
2.5k
views
How to remove uncharacterized chromosomes from GTF file?
grep gtf awk
updated 2.8 years ago by 11k • written 2.8 years ago by ▴ 810
2
votes
8
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2.6k
views
How to subset a gtf based on names in the third column of another file in a single command?
grep rnaseq awk
updated 3.2 years ago by 154k • written 3.2 years ago by ▴ 810
0
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0
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2.6k
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Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
3.2 years ago by Vasu ▴ 810
0
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0
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2.6k
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Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
3.2 years ago by Vasu ▴ 810
0
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0
replies
2.6k
views
Comment: Comment: How to subset a gtf based on names in the third column of another file in a sing
3.2 years ago by Vasu ▴ 810
0
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0
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1.3k
views
Comment: Comment: How to read fastqs from different sequencing runs rather than merging?
3.5 years ago by Vasu ▴ 810
1
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4
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1.3k
views
How to read fastqs from different sequencing runs rather than merging?
ngs rnaseq fastq
updated 3.5 years ago by ★ 7.8k • written 3.5 years ago by ▴ 810
15
votes
12
replies
20k
views
7 follow
Gene set enrichment analysis with logFC and PValue
RNA-Seq gsea r gene expression genesetenrichment
updated 4.8 years ago by ▴ 130 • written 7.1 years ago by ▴ 810
19
votes
5
replies
22k
views
6 follow
showing specific GO pathways in the dotplot or cnetplot
RNA-Seq R clusterprofiler dotplot goenrichment
updated 4.5 years ago by ▴ 10 • written 6.8 years ago by ▴ 810
2
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0
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2.0k
views
Answer: A: Gene Ontology using clusterProfiler
5.4 years ago by Vasu ▴ 810
1
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0
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2.2k
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Answer: A: Pathway/Gene set z-score from log2FC
5.4 years ago by Vasu ▴ 810
0
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1
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3.4k
views
Comment: C: RNA seq data analysis and building co expression network
5.4 years ago by Vasu ▴ 810
0
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1
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3.8k
views
Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
5.5 years ago by Vasu ▴ 810
0
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0
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3.8k
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Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
5.5 years ago by Vasu ▴ 810
0
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1
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3.8k
views
Comment: C: Question about WGCNA Module Eigengenes to Pathway analysis
5.5 years ago by Vasu ▴ 810
5
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6
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3.8k
views
Question about WGCNA Module Eigengenes to Pathway analysis
RNA-Seq wgcna geneexpression coexpressionnetwork
updated 5.5 years ago by 3.9k • written 5.5 years ago by ▴ 810
1
vote
1
reply
1.2k
views
Identification of transcription factor - gene regulation information
RNA-Seq tcga transcription factor
updated 5.9 years ago by 20 • written 6.5 years ago by ▴ 810
0
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0
replies
1.9k
views
Comment: C: Different miRNAs with same miRNA regions in TCGA
6.1 years ago by Vasu ▴ 810
0
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1
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1.9k
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Comment: C: Different miRNAs with same miRNA regions in TCGA
6.1 years ago by Vasu ▴ 810
1
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4
replies
1.9k
views
Different miRNAs with same miRNA regions in TCGA
tcga mirna mirtarbase mirnaseq
6.1 years ago by Vasu ▴ 810
0
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1
reply
2.2k
views
Comment: C: Question about Isoform expression (miRNA) data from TCGA
6.1 years ago by Vasu ▴ 810
8
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3
replies
2.2k
views
Question about Isoform expression (miRNA) data from TCGA
mirna mirnaseq mirbase mirtarbase tcga
updated 6.1 years ago by 22k • written 6.1 years ago by ▴ 810
2
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0
replies
3.3k
views
Comment: C: Question about miRNA nomenclature
6.1 years ago by Vasu ▴ 810
0
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1
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3.3k
views
Comment: C: Question about miRNA nomenclature
6.1 years ago by Vasu ▴ 810
0
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0
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3.3k
views
Comment: C: Question about miRNA nomenclature
6.1 years ago by Vasu ▴ 810
0
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1
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3.3k
views
Comment: C: Question about miRNA nomenclature
6.1 years ago by Vasu ▴ 810
18
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8
replies
3.3k
views
Question about miRNA nomenclature
mirna mirnaseq mirbase
updated 3.8 years ago by 22k • written 6.1 years ago by ▴ 810
3
votes
1
reply
9.8k
views
Ensembl id to GeneSymbol with biomart
biomart
updated 6.3 years ago by 20 • written 8.2 years ago by ▴ 810
1
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0
replies
1.9k
views
Comment: C: Question about chromosomal instability
6.5 years ago by Vasu ▴ 810
0
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1
reply
1.9k
views
Comment: C: Question about chromosomal instability
6.5 years ago by Vasu ▴ 810
0
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1
reply
1.9k
views
Comment: C: Question about chromosomal instability
6.5 years ago by Vasu ▴ 810
0
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0
replies
3.3k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
6.5 years ago by Vasu ▴ 810
0
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1
reply
3.3k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
6.5 years ago by Vasu ▴ 810
0
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1
reply
3.3k
views
Comment: C: Question about differentially expressed genes selection for low sample size data
6.5 years ago by Vasu ▴ 810
11
votes
10
replies
3.3k
views
Question about differentially expressed genes selection for low sample size data
RNA-Seq R geneexpression edger pvalue
updated 6.5 years ago by ★ 1.3k • written 6.5 years ago by ▴ 810
3
votes
6
replies
1.9k
views
Question about chromosomal instability
copy number chromosome gene R genome
updated 6.5 years ago by 89k • written 6.5 years ago by ▴ 810
34
votes
35
replies
21k
views
8 follow
Sample names for TCGA data from GDC-legacy archive
RNA-Seq tcga gdc
updated 6.7 years ago by ▴ 30 • written 7.6 years ago by ▴ 810
0
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1
reply
2.8k
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Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
6.7 years ago by Vasu ▴ 810
0
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1
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2.8k
views
Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
6.7 years ago by Vasu ▴ 810
0
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1
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2.8k
views
Comment: C: Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
6.7 years ago by Vasu ▴ 810
2
votes
7
replies
2.8k
views
Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
survival gdc cbioportal tcga clinicaldata
6.7 years ago by Vasu ▴ 810
3
votes
0
replies
3.8k
views
Comment: C: Error with merge_result with dataframes using clusterprofiler
6.7 years ago by Vasu ▴ 810
296 results • Page 1 of 6
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