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Comment: Comment: How do I figure out pangenome location of hg38 coordinates?
3 months ago by a5864557 ▴ 10
3
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3
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654
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How do I figure out pangenome location of hg38 coordinates?
pangenome hg38 vg
updated 12 weeks ago by • 0 • written 3 months ago by ▴ 10
0
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0
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290
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How to determine which pangenome nodes correspond to hg38 coordinates?
pangenome reference-genome hg38 genomics
5 months ago by a5864557 ▴ 10
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0
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475
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Do different microarray chips yield different accuracy of polygenic scores?
microarray genome SNP polygenic-risk-score
updated 20 months ago by 45k • written 20 months ago by ▴ 10
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955
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Comment: Comment: What is a tool to get the genome build of a VCF?
21 months ago by a5864557 ▴ 10
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3
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955
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What is a tool to get the genome build of a VCF?
bcftools vcf
updated 21 months ago by 45k • written 21 months ago by ▴ 10
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868
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Comment: Comment: Does Beagle use VCF information such as the "GQ" value, depth, or similar?
21 months ago by a5864557 ▴ 10
1
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2
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868
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Does Beagle use VCF information such as the "GQ" value, depth, or similar?
imputation vcf beagle
21 months ago by a5864557 ▴ 10
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2.0k
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Comment: Comment: Running Beagle on a VCF with 1 sample
21 months ago by a5864557 ▴ 10
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1.6k
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Comment: Comment: Is a human genome file with reference as NCBI37 the same as hg19?
2.1 years ago by a5864557 ▴ 10
1
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5
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1.6k
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Is a human genome file with reference as NCBI37 the same as hg19?
vcf hg19 genome reference-genome
updated 2.1 years ago by 152k • written 2.1 years ago by ▴ 10
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1.6k
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Comment: Comment: Is a human genome file with reference as NCBI37 the same as hg19?
2.1 years ago by a5864557 ▴ 10
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2
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1.1k
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Where do I get a large reference VCF?
1000genomes vcf genome reference-genome ukbiobank
updated 2.2 years ago by 11k • written 2.2 years ago by ▴ 10
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1.1k
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Comment: Comment: Where do I get a large reference VCF?
2.2 years ago by a5864557 ▴ 10
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