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Answer: Answer: Best way to install R packages on an HPC?
4 months ago by Charles Plessy ★ 2.9k
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Comment: Comment: How to generate identiy score between aligned sequences with Mauve?
4 months ago by Charles Plessy ★ 2.9k
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2.3k
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Comment: Comment: How to generate identiy score between aligned sequences with Mauve?
5 months ago by Charles Plessy ★ 2.9k
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2
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2.3k
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Answer: Answer: How to generate identiy score between aligned sequences with Mauve?
6 months ago by Charles Plessy ★ 2.9k
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1.5k
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Comment: Comment: AliNe (Alignment in Nextflow)
7 months ago by Charles Plessy ★ 2.9k
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1
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1.5k
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Comment: Comment: How to extract a multiple sequence alignment file from a CRAM file?
7 months ago by Charles Plessy ★ 2.9k
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9
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1.5k
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How to extract a multiple sequence alignment file from a CRAM file?
samtools cram
updated 7 months ago by ★ 4.3k • written 7 months ago by ★ 2.9k
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1
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1.5k
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Comment: Comment: How to extract a multiple sequence alignment file from a CRAM file?
7 months ago by Charles Plessy ★ 2.9k
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2
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1.5k
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Comment: Comment: AliNe (Alignment in Nextflow)
7 months ago by Charles Plessy ★ 2.9k
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2.9k
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Answer: Answer: How to completely align chromosomes/scaffolds from de novo genome assemblies usi
7 months ago by Charles Plessy ★ 2.9k
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1.0k
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Comment: Comment: Searching a tool to modify annotation files.
2.1 years ago by Charles Plessy ★ 2.9k
2
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3
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Searching a tool to modify annotation files.
annotation
2.1 years ago by Charles Plessy ★ 2.9k
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1.7k
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Answer: Answer: How do I install MAQ software on Ubuntu?
3.6 years ago by Charles Plessy ★ 2.9k
3
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2
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1.6k
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Answer: Answer: Cat many paired fasta files in directory in terminal
3.6 years ago by Charles Plessy ★ 2.9k
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1
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2.6k
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Comment: Comment: How can I use ggplot2 to indicate chromosomes on a continuous axis?
3.6 years ago by Charles Plessy ★ 2.9k
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Comment: Comment: .mcool to .hic
3.6 years ago by Charles Plessy ★ 2.9k
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1.6k
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Comment: Comment: Question regarding CAGE and UCSC promoters and enhancers
3.9 years ago by Charles Plessy ★ 2.9k
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1
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1.6k
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Answer: Answer: Question regarding CAGE and UCSC promoters and enhancers
3.9 years ago by Charles Plessy ★ 2.9k
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1.3k
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Answer: Answer: Is there any tool to combine CAGE-seq data, Iso-seq data and RNAseq data?
4.1 years ago by Charles Plessy ★ 2.9k
1
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911
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Tool: A pairwise genome alignment pipeline using LAST and Nextflow
genome LAST Nextflow dotplot alignment
4.1 years ago by Charles Plessy ★ 2.9k
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819
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An ontology term for "gene order" or "gene order conservation"
synteny ontology
4.1 years ago by Charles Plessy ★ 2.9k
2
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1
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12k
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Answer: A: problem with installation of package ggplot2
updated 5.2 years ago by 45k • written 10.2 years ago by ★ 2.9k
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5
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5.9k
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Pretty display of values for samples arranged in a 384-well plate (in R).
qPCR 384-well plate 96-well plate plot R
written 9.6 years ago by ★ 2.9k
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0
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12k
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Answer: A: demultiplex a dataset when you have barcodes as a separate fastq
updated 5.2 years ago by 45k • written 8.3 years ago by ★ 2.9k
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Comment: C: Parsing GENCODE GTF to simpler BED files: am I reinventing the wheel ?
5.4 years ago by Charles Plessy ★ 2.9k
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5.1k
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Comment: C: Is possible to convert BSgenome object to GRange?
5.5 years ago by Charles Plessy ★ 2.9k
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0
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34k
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Comment: C: how to install samtools
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 2.9k
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1
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61k
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Comment: C: reading a bed file a bed file in R
updated 5.9 years ago by 45k • written 9.8 years ago by ★ 2.9k
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0
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6.0k
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Comment: C: Demultiplexing fastq file on Identifier line allowing mismatch
updated 6.0 years ago by 45k • written 10.7 years ago by ★ 2.9k
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0
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2.8k
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Answer: A: Imput files from Refseq database in the program seqret [Emboss]
updated 6.0 years ago by 45k • written 11.2 years ago by ★ 2.9k
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Job: Postdoctoral Position in Population Genomics of an Amazing Animal
evolution population tunicate genome nanopore
updated 2.4 years ago by 45k • written 6.4 years ago by ★ 2.9k
2
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1
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1.5k
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Alternative to tblastn in which one can define a custom genetic code
mitochondria genetic code alignment BLAST
6.4 years ago by Charles Plessy ★ 2.9k
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1
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5.3k
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Comment: C: BLAST 2.3.0 Linux
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 2.9k
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2
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5.3k
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Comment: C: BLAST 2.3.0 Linux
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 2.9k
0
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1
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5.3k
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Comment: C: BLAST 2.3.0 Linux
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 2.9k
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1
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5.3k
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Answer: A: BLAST 2.3.0 Linux
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 2.9k
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0
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2.5k
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Answer: A: Change fasta file header to include number of times a read apears
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 2.9k
1
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0
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3.2k
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Answer: A: awk? how to retrieve info from massive Primer3 output file
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 2.9k
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0
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3.6k
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Answer: A: Remove rows based on duplicates in one column
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 2.9k
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0
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3.7k
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Answer: A: T Cell Receptor Sequencing total reads/clone count vs unique clones
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 2.9k
1
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0
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2.5k
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Answer: A: Bowtie alignment of piRNAs to find potential targets
7.3 years ago by Charles Plessy ★ 2.9k
1
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0
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2.5k
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Answer: A: Bowtie alignment of piRNAs to find potential targets
7.3 years ago by Charles Plessy ★ 2.9k
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0
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3.5k
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Comment: C: Is there an R function that transforms a decimal SAM FLAG into a list of strings
7.4 years ago by Charles Plessy ★ 2.9k
1
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1
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4.7k
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Comment: C: changing the name of files
7.5 years ago by Charles Plessy ★ 2.9k
4
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1
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1.5k
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Best DOI provider for a custom genome index ?
metadata genome DOI
updated 7.5 years ago by ★ 3.0k • written 7.5 years ago by ★ 2.9k
2
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0
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4.4k
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Answer: A: Building bioinformatics tools in Ubuntu 17.10
7.6 years ago by Charles Plessy ★ 2.9k
1
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0
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4.2k
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Comment: C: How to merge quality trimmed interlaced reads?
7.6 years ago by Charles Plessy ★ 2.9k
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0
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2.6k
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Comment: C: suggestions to compare gene counts
7.7 years ago by Charles Plessy ★ 2.9k
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1
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2.6k
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Answer: A: suggestions to compare gene counts
7.7 years ago by Charles Plessy ★ 2.9k
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0
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4.7k
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Answer: A: install genewise (wise2.4.1) on linux
7.7 years ago by Charles Plessy ★ 2.9k
293 results • Page 1 of 6
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