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528
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Comment: Comment: Searching a tool to modify annotation files.
6 months ago by Charles Plessy ★ 2.9k
2
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3
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528
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Searching a tool to modify annotation files.
annotation
6 months ago by Charles Plessy ★ 2.9k
0
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0
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969
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Answer: Answer: How do I install MAQ software on Ubuntu?
2.1 years ago by Charles Plessy ★ 2.9k
3
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2
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900
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Answer: Answer: Cat many paired fasta files in directory in terminal
2.1 years ago by Charles Plessy ★ 2.9k
3
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1
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1.5k
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Comment: Comment: How can I use ggplot2 to indicate chromosomes on a continuous axis?
2.1 years ago by Charles Plessy ★ 2.9k
1
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0
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13k
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Comment: Comment: .mcool to .hic
2.1 years ago by Charles Plessy ★ 2.9k
1
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0
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945
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Comment: Comment: Question regarding CAGE and UCSC promoters and enhancers
2.4 years ago by Charles Plessy ★ 2.9k
2
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1
reply
945
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Answer: Answer: Question regarding CAGE and UCSC promoters and enhancers
2.4 years ago by Charles Plessy ★ 2.9k
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0
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883
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Answer: Answer: Is there any tool to combine CAGE-seq data, Iso-seq data and RNAseq data?
2.6 years ago by Charles Plessy ★ 2.9k
1
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0
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593
views
Tool: A pairwise genome alignment pipeline using LAST and Nextflow
genome LAST Nextflow dotplot alignment
2.6 years ago by Charles Plessy ★ 2.9k
0
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0
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540
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An ontology term for "gene order" or "gene order conservation"
synteny ontology
2.6 years ago by Charles Plessy ★ 2.9k
2
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1
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11k
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Answer: A: problem with installation of package ggplot2
updated 3.7 years ago by 43k • written 8.7 years ago by ★ 2.9k
15
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5
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4.9k
views
Pretty display of values for samples arranged in a 384-well plate (in R).
qPCR 384-well plate 96-well plate plot R
written 8.1 years ago by ★ 2.9k
1
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0
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11k
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Answer: A: demultiplex a dataset when you have barcodes as a separate fastq
updated 3.7 years ago by 43k • written 6.7 years ago by ★ 2.9k
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0
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3.3k
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Comment: C: Parsing GENCODE GTF to simpler BED files: am I reinventing the wheel ?
3.9 years ago by Charles Plessy ★ 2.9k
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0
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3.8k
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Comment: C: Is possible to convert BSgenome object to GRange?
4.0 years ago by Charles Plessy ★ 2.9k
1
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0
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32k
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Comment: C: how to install samtools
updated 4.3 years ago by 43k • written 8.3 years ago by ★ 2.9k
1
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1
reply
51k
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Comment: C: reading a bed file a bed file in R
updated 4.4 years ago by 43k • written 8.3 years ago by ★ 2.9k
1
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0
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5.0k
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Comment: C: Demultiplexing fastq file on Identifier line allowing mismatch
updated 4.5 years ago by 43k • written 9.2 years ago by ★ 2.9k
0
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0
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2.4k
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Answer: A: Imput files from Refseq database in the program seqret [Emboss]
updated 4.5 years ago by 43k • written 9.7 years ago by ★ 2.9k
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0
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1.5k
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Job: Postdoctoral Position in Population Genomics of an Amazing Animal
evolution population tunicate genome nanopore
updated 11 months ago by 43k • written 4.9 years ago by ★ 2.9k
2
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1
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1.1k
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Alternative to tblastn in which one can define a custom genetic code
mitochondria genetic code alignment BLAST
4.9 years ago by Charles Plessy ★ 2.9k
0
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1
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4.1k
views
Comment: C: BLAST 2.3.0 Linux
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
0
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2
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4.1k
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Comment: C: BLAST 2.3.0 Linux
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
0
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1
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4.1k
views
Comment: C: BLAST 2.3.0 Linux
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
0
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1
reply
4.1k
views
Answer: A: BLAST 2.3.0 Linux
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
0
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0
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1.8k
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Answer: A: Change fasta file header to include number of times a read apears
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
1
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0
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2.4k
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Answer: A: awk? how to retrieve info from massive Primer3 output file
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
0
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0
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2.5k
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Answer: A: Remove rows based on duplicates in one column
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
0
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0
replies
2.9k
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Answer: A: T Cell Receptor Sequencing total reads/clone count vs unique clones
updated 5.6 years ago by 43k • written 8.2 years ago by ★ 2.9k
1
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0
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1.9k
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Answer: A: Bowtie alignment of piRNAs to find potential targets
5.8 years ago by Charles Plessy ★ 2.9k
1
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0
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1.9k
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Answer: A: Bowtie alignment of piRNAs to find potential targets
5.8 years ago by Charles Plessy ★ 2.9k
0
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0
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2.8k
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Comment: C: Is there an R function that transforms a decimal SAM FLAG into a list of strings
5.9 years ago by Charles Plessy ★ 2.9k
1
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1
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3.4k
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Comment: C: changing the name of files
6.0 years ago by Charles Plessy ★ 2.9k
4
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1
reply
1.1k
views
Best DOI provider for a custom genome index ?
metadata genome DOI
updated 6.0 years ago by ★ 2.9k • written 6.0 years ago by ★ 2.9k
2
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0
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2.7k
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Answer: A: Building bioinformatics tools in Ubuntu 17.10
6.1 years ago by Charles Plessy ★ 2.9k
1
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0
replies
3.3k
views
Comment: C: How to merge quality trimmed interlaced reads?
6.1 years ago by Charles Plessy ★ 2.9k
0
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0
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1.9k
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Comment: C: suggestions to compare gene counts
6.2 years ago by Charles Plessy ★ 2.9k
0
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1
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1.9k
views
Answer: A: suggestions to compare gene counts
6.2 years ago by Charles Plessy ★ 2.9k
0
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0
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3.8k
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Answer: A: install genewise (wise2.4.1) on linux
6.2 years ago by Charles Plessy ★ 2.9k
5
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0
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12k
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Answer: A: HOw to merge multifasta sequence into a single sequence having only one header?
6.3 years ago by Charles Plessy ★ 2.9k
0
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0
replies
2.3k
views
Comment: C: How can I install xml development headers (version 2.9.1) and xz development he
6.3 years ago by Charles Plessy ★ 2.9k
1
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1
reply
3.1k
views
Answer: A: Demultiplex pair-end fastq reads with barcode 2 in the identifier line
6.3 years ago by Charles Plessy ★ 2.9k
0
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0
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4.3k
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Comment: C: Read genomic ranges from a very big file in R
6.3 years ago by Charles Plessy ★ 2.9k
0
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0
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1.5k
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Comment: C: extracting a column by grepping particular rows
6.3 years ago by Charles Plessy ★ 2.9k
0
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1
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1.5k
views
Answer: A: extracting a column by grepping particular rows
6.3 years ago by Charles Plessy ★ 2.9k
1
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0
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3.1k
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Answer: A: package 'karyoploteR' is not available (for R version 3.3.3)
6.3 years ago by Charles Plessy ★ 2.9k
0
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0
replies
3.6k
views
Answer: A: Where to download older version of R packages in Bioconductor?
6.4 years ago by Charles Plessy ★ 2.9k
1
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1
reply
3.0k
views
Mappability tracks for mm10 ?
mappability
6.4 years ago by Charles Plessy ★ 2.9k
0
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0
replies
1.3k
views
Answer: A: Visualizing Replicates Genome Browser
6.4 years ago by Charles Plessy ★ 2.9k
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