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584
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FALCON_unzip with HGAP4 (smrtlink 9.0)
Assembly next-gen
3.3 years ago by SP ▴ 300
0
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0
replies
1.2k
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Comment: C: De novo alignement with smrttools
3.3 years ago by SP ▴ 300
0
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0
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1.2k
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Comment: A: De novo alignement with smrttools
3.3 years ago by SP ▴ 300
0
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0
replies
1.4k
views
Comment: C: Genome structural annotation (augustus)
5.3 years ago by SP ▴ 300
0
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2
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1.4k
views
Genome structural annotation (augustus)
Augsutus gene annotation genome assembly
updated 5.3 years ago by ▴ 10 • written 5.3 years ago by ▴ 300
16
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10
replies
8.6k
views
6 follow
heatmap.2 has become very slow in plotting heatmap.
R heatmap
updated 7.4 years ago by ▴ 40 • written 7.9 years ago by ▴ 300
1
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0
replies
3.7k
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Comment: C: How can i get only the upregulated and downregulated genes from chip-seq peak fi
7.6 years ago by SP ▴ 300
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0
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4.0k
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Comment: C: Tools to identify enhancers from chromatin marks
7.8 years ago by SP ▴ 300
1
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1
reply
4.0k
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Answer: A: Tools to identify enhancers from chromatin marks
7.8 years ago by SP ▴ 300
0
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1
reply
2.5k
views
Comment: C: How to break broad peaks from H3K9me2 ChIP-Seq?
7.8 years ago by SP ▴ 300
0
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1
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2.5k
views
Answer: A: How to break broad peaks from H3K9me2 ChIP-Seq?
7.8 years ago by SP ▴ 300
0
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1
reply
2.5k
views
Comment: C: How to break broad peaks from H3K9me2 ChIP-Seq?
7.8 years ago by SP ▴ 300
1
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1
reply
3.7k
views
Comment: C: How can i get only the upregulated and downregulated genes from chip-seq peak fi
7.8 years ago by SP ▴ 300
0
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0
replies
1.2k
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Answer: A: representation of chip enrichment in two genomes
7.8 years ago by SP ▴ 300
0
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1
reply
3.7k
views
Answer: A: How can i get only the upregulated and downregulated genes from chip-seq peak fi
7.8 years ago by SP ▴ 300
0
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0
replies
8.6k
views
Comment: C: heatmap.2 has become very slow in plotting heatmap.
7.8 years ago by SP ▴ 300
1
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0
replies
1.8k
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Answer: A: does peak in CHIP-seq mean the sequence depth in treatment sample will be bigger
7.8 years ago by SP ▴ 300
2
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0
replies
4.3k
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Answer: A: How to get nucleotide sequences for a given list of genomic positions.
7.9 years ago by SP ▴ 300
2
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0
replies
2.1k
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Answer: A: Looking for the best way to annotate histone modicitation marks to genes.
7.9 years ago by SP ▴ 300
1
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1
reply
9.2k
views
Answer: A: TPM for ChIP-seq normalization
7.9 years ago by SP ▴ 300
29
votes
18
replies
9.2k
views
7 follow
TPM for ChIP-seq normalization
ChIP-Seq TPM
updated 7.9 years ago by ★ 3.6k • written 7.9 years ago by ▴ 300
0
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0
replies
9.2k
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Comment: C: TPM for ChIP-seq normalization
7.9 years ago by SP ▴ 300
0
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1
reply
9.2k
views
Comment: C: TPM for ChIP-seq normalization
7.9 years ago by SP ▴ 300
0
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0
replies
9.2k
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Comment: C: TPM for ChIP-seq normalization
7.9 years ago by SP ▴ 300
0
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0
replies
9.2k
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Comment: C: TPM for ChIP-seq normalization
7.9 years ago by SP ▴ 300
2
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1
reply
9.2k
views
Comment: C: TPM for ChIP-seq normalization
7.9 years ago by SP ▴ 300
6
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0
replies
45k
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Answer: A: Using transcripts per million (TPM)
7.9 years ago by SP ▴ 300
0
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0
replies
2.3k
views
Comment: C: For Chip-seq, which control data I should choose for each biological replicate s
7.9 years ago by SP ▴ 300
0
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1
reply
8.6k
views
Comment: C: heatmap.2 has become very slow in plotting heatmap.
7.9 years ago by SP ▴ 300
3
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5
replies
4.4k
views
How to calculate P-value for biological repeats of ChIP-qPCR?
chip-qpcr p-value
updated 21 months ago by 43k • written 8.3 years ago by ▴ 300
1
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0
replies
1.8k
views
Comment: Comment: Program/Tool that can determine whether two profiles are likely to be from the s
updated 21 months ago by 43k • written 8.3 years ago by ▴ 300
0
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0
replies
4.4k
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Comment: C: How to calculate P-value for biological repeats of ChIP-qPCR?
8.3 years ago by SP ▴ 300
0
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1
reply
4.4k
views
Comment: C: How to calculate P-value for ChIP-qPCR?
8.3 years ago by SP ▴ 300
0
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1
reply
2.1k
views
Comment: Comment: Finding position of transposones in human genome.
updated 16 months ago by 43k • written 8.8 years ago by ▴ 300
0
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0
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2.1k
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Comment: C: Finding position of transposones in human genome.
8.8 years ago by SP ▴ 300
0
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5
replies
2.1k
views
Finding position of transposones in human genome.
genome ChIP-Seq
updated 16 months ago by 43k • written 8.8 years ago by ▴ 300
0
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0
replies
1.6k
views
Comment: Comment: How to create interaction networks from Agilent microarray data?
updated 16 months ago by 43k • written 8.8 years ago by ▴ 300
2
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1
reply
1.7k
views
Retrotransposon analysis on ChIP-seq data.
ChIP-Seq
updated 16 months ago by 43k • written 8.8 years ago by ▴ 300
1
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0
replies
1.6k
views
Answer: A: How to create interaction networks from Agilent microarray data?
8.8 years ago by SP ▴ 300
0
votes
0
replies
1.9k
views
Comment: Comment: Analysis for Unknwon motifs obtained from Meme or Dream.
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 300
1
vote
4
replies
1.9k
views
Analysis for Unknwon motifs obtained from Meme or Dream.
ChIP-Seq motif
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 300
0
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0
replies
1.9k
views
Comment: Comment: Analysis for Unknwon motifs obtained from Meme or Dream.
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 300
2
votes
1
reply
1.9k
views
How to predefine Chipseq peak calling peak length in MACS?
ChIP-Seq
updated 2.1 years ago by 43k • written 9.3 years ago by ▴ 300
0
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0
replies
14k
views
Comment: Comment: Creating reference Index using Bowtie2
updated 2.5 years ago by 43k • written 9.4 years ago by ▴ 300
44 results • Page 1 of 1
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