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4
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2
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3.7k
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Pruning a dense SNP dataset without losing too much LD
plink
updated 11 weeks ago by 37k • written 7.4 years ago by ▴ 60
0
votes
0
replies
3.2k
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Comment: C: converting very small p-values into chi-squared statistics with python
5.2 years ago by yorgos.athanasiadis ▴ 60
2
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0
replies
3.2k
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Answer: A: converting very small p-values into chi-squared statistics with python
5.2 years ago by yorgos.athanasiadis ▴ 60
3
votes
4
replies
3.2k
views
converting very small p-values into chi-squared statistics with python
python chi-squared p-value upper tail gwas
5.2 years ago by yorgos.athanasiadis ▴ 60
0
votes
1
reply
1.2k
views
GeneticsBase for 3.1.1
GeneticsBase R Bioconductor
updated 6.2 years ago by 20 • written 7.5 years ago by ▴ 60
0
votes
0
replies
1.7k
views
PSMC: create pseudo-diploid male X chromosomes from different species
PSMC X chromosome fastq
6.7 years ago by yorgos.athanasiadis ▴ 60
2
votes
1
reply
3.7k
views
Changing the order of ref/alt alleles in a phased vcf file
strand flip DNA ref/alt plink vcftools
updated 7.3 years ago by ▴ 490 • written 7.3 years ago by ▴ 60
0
votes
1
reply
2.8k
views
Comment: C: Convert from oxford to plink format with no missing genotypes
7.4 years ago by yorgos.athanasiadis ▴ 60
1
vote
3
replies
2.8k
views
Convert from oxford to plink format with no missing genotypes
plink impute2 chromopainter
updated 12 weeks ago by 37k • written 7.4 years ago by ▴ 60
0
votes
0
replies
3.4k
views
Comment: Comment: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 5 months ago by 37k • written 7.7 years ago by ▴ 60
1
vote
1
reply
3.4k
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Comment: Comment: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 5 months ago by 37k • written 7.7 years ago by ▴ 60
0
votes
1
reply
3.4k
views
Answer: Answer: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 5 months ago by 37k • written 7.7 years ago by ▴ 60
1
vote
6
replies
3.4k
views
How to bypass SNPs with identical A1 and A2 alleles in PLINK?
plink imputation merge shapeit impute2
updated 5 months ago by 37k • written 7.7 years ago by ▴ 60
0
votes
0
replies
6.2k
views
Comment: Comment: PLINK returns NA values for all minor allele frequencies in my data
updated 8 months ago by 37k • written 8.0 years ago by ▴ 60
3
votes
6
replies
3.0k
views
create plink files from 23andMe JSON files
plink JSON SNP 23andMe
updated 8 months ago by 37k • written 8.0 years ago by ▴ 60
0
votes
0
replies
3.0k
views
Comment: Comment: create plink files from 23andMe JSON files
updated 8 months ago by 37k • written 8.0 years ago by ▴ 60
0
votes
0
replies
6.2k
views
Comment: Comment: PLINK returns NA values for all minor allele frequencies in my data
updated 8 months ago by 37k • written 8.0 years ago by ▴ 60
0
votes
2
replies
6.2k
views
Comment: C: PLINK returns NA values for all minor allele frequencies in my data
8.0 years ago by yorgos.athanasiadis ▴ 60
0
votes
1
reply
3.0k
views
Comment: Comment: create plink files from 23andMe JSON files
updated 8 months ago by 37k • written 8.0 years ago by ▴ 60
2
votes
6
replies
6.2k
views
PLINK returns NA values for all minor allele frequencies in my data
freq plink maf SNP
updated 8 months ago by 37k • written 8.0 years ago by ▴ 60
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