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4
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2
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4.3k
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Pruning a dense SNP dataset without losing too much LD
plink
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 70
0
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0
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4.9k
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Comment: C: converting very small p-values into chi-squared statistics with python
8.2 years ago by yorgos.athanasiadis ▴ 70
3
votes
4
replies
4.9k
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converting very small p-values into chi-squared statistics with python
python chi-squared p-value upper tail gwas
8.2 years ago by yorgos.athanasiadis ▴ 70
2
votes
0
replies
4.9k
views
Answer: A: converting very small p-values into chi-squared statistics with python
8.2 years ago by yorgos.athanasiadis ▴ 70
0
votes
1
reply
1.6k
views
GeneticsBase for 3.1.1
GeneticsBase R Bioconductor
updated 9.1 years ago by 20 • written 10.4 years ago by ▴ 70
0
votes
0
replies
2.0k
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PSMC: create pseudo-diploid male X chromosomes from different species
PSMC X chromosome fastq
9.6 years ago by yorgos.athanasiadis ▴ 70
2
votes
1
reply
4.6k
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Changing the order of ref/alt alleles in a phased vcf file
strand-flip plink vcftools
updated 2.7 years ago by 45k • written 10.3 years ago by ▴ 70
0
votes
1
reply
3.5k
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Comment: C: Convert from oxford to plink format with no missing genotypes
10.4 years ago by yorgos.athanasiadis ▴ 70
1
vote
3
replies
3.5k
views
Convert from oxford to plink format with no missing genotypes
plink impute2 chromopainter
updated 3.2 years ago by 45k • written 10.4 years ago by ▴ 70
0
votes
0
replies
4.9k
views
Comment: Comment: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 70
1
vote
1
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4.9k
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Comment: Comment: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 70
1
vote
6
replies
4.9k
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How to bypass SNPs with identical A1 and A2 alleles in PLINK?
plink imputation merge shapeit impute2
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 70
0
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1
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4.9k
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Answer: Answer: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 3.4 years ago by 45k • written 10.6 years ago by ▴ 70
0
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0
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8.5k
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Comment: Comment: PLINK returns NA values for all minor allele frequencies in my data
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 70
3
votes
6
replies
4.8k
views
create plink files from 23andMe JSON files
plink JSON SNP 23andMe
updated 3.6 years ago by 45k • written 11.0 years ago by ▴ 70
0
votes
0
replies
4.8k
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Comment: Comment: create plink files from 23andMe JSON files
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 70
0
votes
0
replies
8.5k
views
Comment: Comment: PLINK returns NA values for all minor allele frequencies in my data
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 70
0
votes
2
replies
8.5k
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Comment: C: PLINK returns NA values for all minor allele frequencies in my data
10.9 years ago by yorgos.athanasiadis ▴ 70
0
votes
1
reply
4.8k
views
Comment: Comment: create plink files from 23andMe JSON files
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 70
4
votes
6
replies
8.5k
views
PLINK returns NA values for all minor allele frequencies in my data
freq plink maf SNP
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 70
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