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Comment: Comment: RNA-seq assigned alignments
3 months ago by Manko47 ▴ 10
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4
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793
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RNA-seq assigned alignments
paired-end STAR RNA-seq mapping single-end
updated 3 months ago by ▴ 270 • written 3 months ago by ▴ 10
6
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5
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2.0k
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ATAC-seq paired-end data peakcalling on MACS3 - BAMPE vs (BAM and shift with extsize)
MACS3 BAMPE BAM Peakcalling ATAC-seq
updated 8 months ago by 89k • written 8 months ago by ▴ 10
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0
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892
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Comment: Comment: RNA-seq combined treatment interaction experiment design
9 months ago by Manko47 ▴ 10
2
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2
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892
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RNA-seq combined treatment interaction experiment design
RNA-seq DESeq2
updated 9 months ago by 45k • written 9 months ago by ▴ 10
1
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1
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875
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Diffbind fold values and parameter Fold in DBA.report function
DESEQ2 ATAC-seq DBA.report Diffbind
16 months ago by Manko47 ▴ 10
1
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0
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875
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Answer: Answer: Diffbind fold values and parameter Fold in DBA.report function
16 months ago by Manko47 ▴ 10
3
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1
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955
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Trouble understanding seemingly contradicting results of GSE analysis (contradicting enriched GO terms with similar negative NES scores)
GSEA pathways GO-terms
updated 18 months ago by 22k • written 18 months ago by ▴ 10
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2
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2.5k
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Comment: Comment: STAR mapping - regarding output files content
2.2 years ago by Manko47 ▴ 10
4
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5
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2.5k
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STAR mapping - regarding output files content
STAR RNA-seq mapping
updated 2.2 years ago by ★ 1.7k • written 2.2 years ago by ▴ 10
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