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Answer: Answer: How can I generate a list of 100 genomic intervals that are 100kb long and in wh
2.3 years ago by LauferVA 4.8k
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Comment: Comment: How to find gene id and gene name after I know rsid
2.3 years ago by LauferVA 4.8k
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Comment: Comment: Multiple testing correction in RNA-Seq
2.3 years ago by LauferVA 4.8k
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Comment: Comment: Whole transcriptome analysis nominated primarily miRNA-related pathways. Advice?
2.3 years ago by LauferVA 4.8k
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Comment: Comment: Whole transcriptome analysis nominated primarily miRNA-related pathways. Advice?
2.3 years ago by LauferVA 4.8k
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Whole transcriptome analysis nominated primarily miRNA-related pathways. Advice?
miRNA RNA-seq QC GSEA
2.3 years ago by LauferVA 4.8k
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2.7k
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Comment: Comment: search for intron conservancy across species
2.3 years ago by LauferVA 4.8k
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Comment: Comment: Would you rather analyze a dataset with a strong, non-collinear batch effect, or
2.3 years ago by LauferVA 4.8k
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2.7k
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Comment: Comment: search for intron conservancy across species
2.3 years ago by LauferVA 4.8k
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18k
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Forum: Would you rather analyze a dataset with a strong, non-collinear batch effect, or a weak, collinear batch effect.
collinear latent batch-effect variable GLM
2.3 years ago by LauferVA 4.8k
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2.7k
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Answer: Answer: search for intron conservancy across species
2.3 years ago by LauferVA 4.8k
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1.4k
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Comment: Comment: Optimal Over Representation Analysis DE genes foldFC threshold?
2.3 years ago by LauferVA 4.8k
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802
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Answer: Answer: limma-voom model design
2.3 years ago by LauferVA 4.8k
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2.2k
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Comment: Comment: How to find gene id and gene name after I know rsid
2.3 years ago by LauferVA 4.8k
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1.4k
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Comment: Comment: Optimal Over Representation Analysis DE genes foldFC threshold?
2.3 years ago by LauferVA 4.8k
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661
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Comment: Comment: Identifying Drug hits for a Group of cell Lines
2.3 years ago by LauferVA 4.8k
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1.7k
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Answer: Answer: A very rookie Question
2.3 years ago by LauferVA 4.8k
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4.2k
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Comment: Comment: Advantages of install.packages() versus BiocManager::install()
2.3 years ago by LauferVA 4.8k
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1
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2.5k
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Answer: Answer: Revisit where to find CCLE RNAseq in FPKM or RPKM using RSEM values to perfo
2.3 years ago by LauferVA 4.8k
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Comment: Comment: Understanding Used Assembly: Why aren't authors specific about patch version?
2.3 years ago by LauferVA 4.8k
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Answer: Answer: Is there a way to add filters such as article type ("only show meta-analysis/sys
2.3 years ago by LauferVA 4.8k
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2.9k
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Comment: Comment: Normalization of Batch effect removal
2.3 years ago by LauferVA 4.8k
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2.9k
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Comment: Comment: Normalization of Batch effect removal
2.3 years ago by LauferVA 4.8k
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1
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2.9k
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Comment: Comment: Normalization of Batch effect removal
2.3 years ago by LauferVA 4.8k
2
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1.6k
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Answer: Answer: Factors affecting the size of a structural variant
2.3 years ago by LauferVA 4.8k
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1
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2.9k
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Answer: Answer: Normalization of Batch effect removal
2.3 years ago by LauferVA 4.8k
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1.7k
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Comment: Comment: cBioPortal data with negative log2(FPKM + 1) values
2.3 years ago by LauferVA 4.8k
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2.3k
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Comment: Comment: How can there be numerous high quality heterozygous y chromosome alleles not wit
2.3 years ago by LauferVA 4.8k
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Comment: Comment: Can you recommend me a database of bacterial gene essentiality?
2.3 years ago by LauferVA 4.8k
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3.5k
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Comment: Comment: I want to rename sequence headers
2.3 years ago by LauferVA 4.8k
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Comment: Comment: Should primary tumor RNA-Seq match their derived cell lines and PDXs? And which
2.3 years ago by LauferVA 4.8k
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1.4k
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Comment: Comment: Purely analytic or in silico manuscripts that have significantly improved biolog
2.3 years ago by LauferVA 4.8k
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0
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2.3k
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Comment: Comment: How can there be numerous high quality heterozygous y chromosome alleles not wit
2.3 years ago by LauferVA 4.8k
5
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2.3k
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Answer: Answer: How can there be numerous high quality heterozygous y chromosome alleles not wit
2.3 years ago by LauferVA 4.8k
2
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Forum: Purely analytic or in silico manuscripts that have significantly improved biological understanding
dry-lab
updated 2.3 years ago by 154k • written 2.3 years ago by 4.8k
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4.5k
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Comment: Comment: Multiple testing correction in RNA-Seq
2.3 years ago by LauferVA 4.8k
1
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1
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4.5k
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Comment: Comment: Multiple testing correction in RNA-Seq
2.3 years ago by LauferVA 4.8k
1
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1
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4.5k
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Comment: Comment: Multiple testing correction in RNA-Seq
2.3 years ago by LauferVA 4.8k
0
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1
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1.7k
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Comment: Comment: cBioPortal data with negative log2(FPKM + 1) values
2.3 years ago by LauferVA 4.8k
1
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6
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1.7k
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cBioPortal data with negative log2(FPKM + 1) values
FPKM cBioPortal
2.3 years ago by LauferVA 4.8k
0
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0
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1.7k
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Comment: Comment: cBioPortal data with negative log2(FPKM + 1) values
2.3 years ago by LauferVA 4.8k
0
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1
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4.2k
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Comment: Comment: Advantages of install.packages() versus BiocManager::install()
2.3 years ago by LauferVA 4.8k
1
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1
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3.5k
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Comment: Comment: Should and can we use the new draft pangenome reference?
2.3 years ago by LauferVA 4.8k
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577
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Is anyone aware of a function that will create a MultiAssayExperiment() based on the structure of flat files?
processing File MultiAssayExperiment Automation
2.3 years ago by LauferVA 4.8k
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1.3k
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Comment: Comment: How to create a website using Python
2.3 years ago by LauferVA 4.8k
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2.9k
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Answer: Answer: Comparing P-Values & FDR adjusted p-values between RNA-Seq experiments?
2.3 years ago by LauferVA 4.8k
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1.3k
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Comment: Comment: Two spatial transcriptomics datasets from same patient
2.3 years ago by LauferVA 4.8k
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2.0k
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Comment: Comment: Strange clustering of genes with circlize
2.3 years ago by LauferVA 4.8k
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1.3k
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Comment: Comment: Mapping transcript location issue.
2.3 years ago by LauferVA 4.8k
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2.6k
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Comment: Comment: Batch correction for Nanopore RNAseq
2.3 years ago by LauferVA 4.8k
793 results • Page 5 of 16
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