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Comment: C: normalization with DEseq2
updated 6.8 years ago by 45k • written 10.1 years ago by ★ 5.2k
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8.7k
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Comment: C: normalization with DEseq2
updated 6.8 years ago by 45k • written 10.1 years ago by ★ 5.2k
1
vote
1
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8.7k
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Comment: C: normalization with DEseq2
updated 6.8 years ago by 45k • written 10.1 years ago by ★ 5.2k
2
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1
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8.7k
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Answer: A: normalization with DEseq2
updated 6.8 years ago by 45k • written 10.1 years ago by ★ 5.2k
2
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0
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1.9k
views
Answer: A: FastQ ColorSpace to BaseSpace format in 2018
7.0 years ago by Antonio R. Franco ★ 5.2k
0
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0
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1.4k
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Answer: A: weird number in log2FC
7.0 years ago by Antonio R. Franco ★ 5.2k
0
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0
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19k
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Comment: C: Orientation of PE reads a review of --fr --ff and --rf meanings
7.0 years ago by Antonio R. Franco ★ 5.2k
1
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1
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4.4k
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Comment: C: Installing samtools from sourceforge
7.1 years ago by Antonio R. Franco ★ 5.2k
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1
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4.4k
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Answer: A: Installing samtools from sourceforge
7.1 years ago by Antonio R. Franco ★ 5.2k
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1
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2.9k
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Answer: A: Per base GC content with a shoulder after adapter removal and trimming
7.1 years ago by Antonio R. Franco ★ 5.2k
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1
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2.4k
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Comment: C: CpG Methylation data from PacBio sequencing
7.1 years ago by Antonio R. Franco ★ 5.2k
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1
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2.4k
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Answer: A: CpG Methylation data from PacBio sequencing
7.1 years ago by Antonio R. Franco ★ 5.2k
2
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0
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2.6k
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Answer: A: design matrix for time point comparision [1 treatment] in time course RNA Seq -
7.1 years ago by Antonio R. Franco ★ 5.2k
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0
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1.7k
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Answer: A: How to use simultaneously long and short reads to assemble de novo a transcript
7.1 years ago by Antonio R. Franco ★ 5.2k
3
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0
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2.4k
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Answer: A: Organizing tools/ software
7.1 years ago by Antonio R. Franco ★ 5.2k
0
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1
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8.8k
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Comment: C: SE reads in fr-firststrand, fr-secondstrand
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 5.2k
1
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2
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8.8k
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Answer: A: SE reads in fr-firststrand, fr-secondstrand
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 5.2k
1
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0
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2.1k
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Answer: A: sequence alignment of protein sequence
7.1 years ago by Antonio R. Franco ★ 5.2k
0
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0
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13k
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Comment: C: Problem In running read.Table function in R
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 5.2k
0
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1
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13k
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Comment: C: Problem In running read.Table function in R
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 5.2k
2
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1
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13k
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Answer: A: Problem In running read.Table function in R
updated 7.1 years ago by 45k • written 9.7 years ago by ★ 5.2k
0
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0
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3.3k
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Answer: A: blast running for several splitted query
updated 7.2 years ago by 45k • written 10.5 years ago by ★ 5.2k
1
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1
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4.4k
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Comment: C: BLAST multiple database against each other
7.2 years ago by Antonio R. Franco ★ 5.2k
0
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1
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29k
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Answer: A: Best trimming tool
updated 7.2 years ago by 45k • written 9.7 years ago by ★ 5.2k
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0
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27k
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Comment: C: Heatmap.2 R for differentially expressed genes DeSEQ2
updated 7.2 years ago by 45k • written 9.7 years ago by ★ 5.2k
0
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0
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3.1k
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Answer: A: Find patterns in DNA sequence
updated 7.2 years ago by 45k • written 9.7 years ago by ★ 5.2k
1
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1
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1.8k
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Answer: A: returning the gene name back to my matrix
updated 7.2 years ago by 45k • written 9.7 years ago by ★ 5.2k
1
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1
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1.8k
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Answer: A: returning the gene name back to my matrix
updated 7.2 years ago by 45k • written 9.7 years ago by ★ 5.2k
2
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1
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1.8k
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Answer: A: returning the gene name back to my matrix
updated 7.2 years ago by 45k • written 9.7 years ago by ★ 5.2k
0
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0
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42k
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Comment: C: Extracting Sequence From A 3Gb Fasta File
updated 7.2 years ago by 45k • written 9.8 years ago by ★ 5.2k
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2
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2.2k
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Comment: C: micro-array analysis without FoldChange
7.3 years ago by Antonio R. Franco ★ 5.2k
1
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1
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3.4k
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Comment: A: Conversion of Fasta file
7.3 years ago by Antonio R. Franco ★ 5.2k
0
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1
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2.1k
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Answer: A: Exonic SNPs extraction
7.3 years ago by Antonio R. Franco ★ 5.2k
0
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0
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11k
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Answer: A: rRNA remove from RNAseq data
7.3 years ago by Antonio R. Franco ★ 5.2k
0
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0
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4.7k
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Comment: A: De novo plant genome assembly
7.4 years ago by Antonio R. Franco ★ 5.2k
0
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0
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1.7k
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Answer: A: how can we create heat map for only upregulated gene list
7.4 years ago by Antonio R. Franco ★ 5.2k
7
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3
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2.3k
views
Asking about programs and methods to get gene methylation profiles
methylation profiles
updated 7.4 years ago by 13k • written 7.4 years ago by ★ 5.2k
1
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0
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4.0k
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Answer: A: Salmon choosing library type
7.4 years ago by Antonio R. Franco ★ 5.2k
3
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1
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7.1k
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Answer: A: What are the best tools for visualizing DNA methylation result?
7.4 years ago by Antonio R. Franco ★ 5.2k
0
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0
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11k
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Answer: A: Gallery: Computational tools for DNA methylation
7.4 years ago by Antonio R. Franco ★ 5.2k
1
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0
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12k
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Answer: A: RPKM to TPM conversion?
7.4 years ago by Antonio R. Franco ★ 5.2k
1
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1
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5.6k
views
Comment: A: Extract uniquely mapped reads from one species
7.4 years ago by Antonio R. Franco ★ 5.2k
1
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1
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5.3k
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Answer: A: Could somebody suggest free pathway visualization tool for omics data from plant
7.4 years ago by Antonio R. Franco ★ 5.2k
2
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0
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3.8k
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Answer: A: The best way to produce gene body coverage
7.4 years ago by Antonio R. Franco ★ 5.2k
0
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1
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4.8k
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Comment: C: get identical number of read1 and read2 aligned
7.4 years ago by Antonio R. Franco ★ 5.2k
1
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1
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4.8k
views
Comment: C: get identical number of read1 and read2 aligned
7.4 years ago by Antonio R. Franco ★ 5.2k
1
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1
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4.8k
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Answer: A: how can I get identical read1 and read2?
7.4 years ago by Antonio R. Franco ★ 5.2k
0
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1
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1.5k
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Answer: A: What is the exact number of gene that we can detect from differentially expresse
7.4 years ago by Antonio R. Franco ★ 5.2k
0
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1
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2.4k
views
Need help with methylation bias
bismark bwameth methylation epigenesis
updated 7.5 years ago by 105k • written 7.5 years ago by ★ 5.2k
0
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1
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16k
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Comment: C: Interpreting distance from clustal omega
7.5 years ago by Antonio R. Franco ★ 5.2k
683 results • Page 5 of 14
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