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Answer: A: Improve the performance in Local blast
9.5 years ago by Antonio R. Franco ★ 5.2k
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4.1k
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Comment: C: velveth (fasta does not seem to be in FastA format)
9.5 years ago by Antonio R. Franco ★ 5.2k
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4.8k
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Answer: A: overlapping nucleotides in sequence alignment
9.5 years ago by Antonio R. Franco ★ 5.2k
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4.2k
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Comment: C: BLOSUM80 values differ - but what's the reason?
9.5 years ago by Antonio R. Franco ★ 5.2k
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2.1k
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Answer: A: how to detect repetitive motifs in gene?
9.5 years ago by Antonio R. Franco ★ 5.2k
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3.8k
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Answer: A: The best factors to evaluate the quality of de novo transcriptome assembly
9.5 years ago by Antonio R. Franco ★ 5.2k
2
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5
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2.1k
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Strategy for transcriptomic assembly. What do you think is the best way to do it?
Trinity Transcriptome RNA-Seq
updated 9.5 years ago by 20 • written 9.6 years ago by ★ 5.2k
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Answer: A: Blast or mapper ?
9.5 years ago by Antonio R. Franco ★ 5.2k
1
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2.4k
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Answer: A: Is there any reason to analyze plus/minus strands separately in bisulfite seq/me
9.5 years ago by Antonio R. Franco ★ 5.2k
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5.6k
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Comment: C: Very low mapping rate of a bam file, reasons?
9.5 years ago by Antonio R. Franco ★ 5.2k
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1
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2.1k
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Comment: C: Strategy for transcriptomic assembly. What do you think is the best way to do it
9.5 years ago by Antonio R. Franco ★ 5.2k
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0
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5.6k
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Answer: A: Very low mapping rate of a bam file, reasons?
9.5 years ago by Antonio R. Franco ★ 5.2k
2
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1
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5.6k
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Comment: A: Very low mapping rate of a bam file, reasons?
9.5 years ago by Antonio R. Franco ★ 5.2k
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3.5k
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Comment: C: How would you discover the source of contaminant DNA ?
9.6 years ago by Antonio R. Franco ★ 5.2k
7
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12
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3.5k
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How would you discover the source of contaminant DNA ?
genome Illumina
updated 9.6 years ago by 10k • written 9.6 years ago by ★ 5.2k
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Answer: A: How would you discover the source of contaminant DNA ?
9.6 years ago by Antonio R. Franco ★ 5.2k
1
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8.0k
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Comment: C: Remove contaminant reads using Bowtie2
9.6 years ago by Antonio R. Franco ★ 5.2k
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3.5k
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Comment: C: How would you discover the source of contaminant DNA ?
9.6 years ago by Antonio R. Franco ★ 5.2k
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3.5k
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Comment: C: How would you discover the source of contaminant DNA ?
9.6 years ago by Antonio R. Franco ★ 5.2k
1
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2.8k
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Answer: A: Coursera Genomic Data Science courses
9.6 years ago by Antonio R. Franco ★ 5.2k
4
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8.0k
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Answer: A: Remove contaminant reads using Bowtie2
9.6 years ago by Antonio R. Franco ★ 5.2k
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0
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3.6k
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Answer: A: How to remove duplicated sequences from multi fasta file?
9.6 years ago by Antonio R. Franco ★ 5.2k
1
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4.0k
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Answer: A: Combing multiple fasta files into one fasta for performing alignment
9.6 years ago by Antonio R. Franco ★ 5.2k
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0
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3.4k
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Comment: C: which strand PacBio sequence?
9.6 years ago by Antonio R. Franco ★ 5.2k
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8.9k
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Answer: A: Why there is a big difference for blastn and blastx results of a given sequence
9.6 years ago by Antonio R. Franco ★ 5.2k
2
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1
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3.4k
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Answer: A: which strand PacBio sequence?
9.6 years ago by Antonio R. Franco ★ 5.2k
1
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2
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5.7k
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Answer: A: Big news from Microsoft. BASH on windows.
9.6 years ago by Antonio R. Franco ★ 5.2k
0
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0
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3.4k
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Answer: A: Three reads with the same name in the BAM file
9.6 years ago by Antonio R. Franco ★ 5.2k
0
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0
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4.5k
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Comment: C: How to retrieve all the intron sequences and information (e.g. location) if I ha
9.6 years ago by Antonio R. Franco ★ 5.2k
0
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1
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3.5k
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Answer: A: RNAseq problems with tophat
9.6 years ago by Antonio R. Franco ★ 5.2k
0
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1
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4.5k
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Answer: A: How to retrieve all the intron sequences and information (e.g. location) if I ha
9.7 years ago by Antonio R. Franco ★ 5.2k
0
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3.4k
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Comment: C: Trimming RNA Seq data - Invalid nucleotide sequence
9.7 years ago by Antonio R. Franco ★ 5.2k
0
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1
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3.4k
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Comment: C: Trimming RNA Seq data - Invalid nucleotide sequence
9.7 years ago by Antonio R. Franco ★ 5.2k
0
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0
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3.4k
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Comment: C: Trimming RNA Seq data - Invalid nucleotide sequence
9.7 years ago by Antonio R. Franco ★ 5.2k
0
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1
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3.4k
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Comment: C: Trimming RNA Seq data - Invalid nucleotide sequence
9.7 years ago by Antonio R. Franco ★ 5.2k
2
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0
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1.9k
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Answer: A: Can not find a single windows large tree editor.
9.7 years ago by Antonio R. Franco ★ 5.2k
0
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0
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2.9k
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Answer: A: Scaffolding for metagenomics
9.7 years ago by Antonio R. Franco ★ 5.2k
0
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1
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3.9k
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Comment: C: RNA seq FASTX quality trimming
9.7 years ago by Antonio R. Franco ★ 5.2k
2
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1
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3.9k
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Answer: A: RNA seq FASTX quality trimming
9.7 years ago by Antonio R. Franco ★ 5.2k
1
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1
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19k
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Comment: C: paired end illumina reads
9.7 years ago by Antonio R. Franco ★ 5.2k
1
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1
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19k
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Comment: Comment: paired end illumina reads
updated 3.3 years ago by 45k • written 9.7 years ago by ★ 5.2k
1
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1
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19k
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Comment: C: paired end illumina reads
9.7 years ago by Antonio R. Franco ★ 5.2k
1
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1
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2.0k
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Recommendations for bacterial data integration and/or System Biology
proteomic metabolomic transcriptomic integration
updated 9.7 years ago by 6.7k • written 9.7 years ago by ★ 5.2k
1
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1
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19k
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Comment: C: paired end illumina reads
9.7 years ago by Antonio R. Franco ★ 5.2k
2
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1
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19k
views
Comment: Comment: paired end illumina reads
updated 3.3 years ago by 45k • written 9.7 years ago by ★ 5.2k
0
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0
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19k
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Comment: C: paired end illumina reads
9.7 years ago by Antonio R. Franco ★ 5.2k
1
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1
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19k
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Comment: C: paired end illumina reads
9.7 years ago by Antonio R. Franco ★ 5.2k
1
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1
reply
19k
views
Comment: C: paired end illumina reads
9.7 years ago by Antonio R. Franco ★ 5.2k
0
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1
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19k
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Comment: C: paired end illumina reads
9.7 years ago by Antonio R. Franco ★ 5.2k
0
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1
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34k
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Answer: A: Bowtie2 (ERR): bowtie2-align exited with value 1
9.7 years ago by Antonio R. Franco ★ 5.2k
683 results • Page 9 of 14
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