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4
votes
1
reply
9.2k
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Answer: A: From FASTA file to GO-annotation
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 5.1k
1
vote
0
replies
3.1k
views
Answer: A: Assembly pipeline De Novo | Reference
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 5.1k
0
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0
replies
3.1k
views
Answer: A: VelvetOptimizer:Error in running the program
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 5.1k
0
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0
replies
2.8k
views
Comment: C: Next generation sequencing methodology
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 5.1k
2
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1
reply
2.8k
views
Answer: A: Next generation sequencing methodology
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 5.1k
0
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0
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5.1k
views
Answer: A: reverse complement in Assembly!
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
0
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1
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2.4k
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Comment: C: Struggling with the information contained into a BAM/SAM file
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
1
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0
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5.6k
views
Answer: A: Error while mapping reads to assembly using bowtie
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
2
votes
1
reply
14k
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Comment: C: paired end illumina reads
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
0
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0
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2.3k
views
Comment: C: Calculate the number of paired-end reads their middle size is greater than # KB
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
1
vote
0
replies
14k
views
Answer: A: paired end illumina reads
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
1
vote
1
reply
14k
views
Comment: C: paired end illumina reads
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
1
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0
replies
5.8k
views
Answer: A: getting RPKM and VST using DEseq2 package
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
0
votes
0
replies
2.0k
views
Answer: A: Exon inton structure
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 5.1k
0
votes
1
reply
2.2k
views
Answer: A: Disease pathway prediction
updated 4.5 years ago by 43k • written 8.9 years ago by ★ 5.1k
1
vote
1
reply
25k
views
Answer: A: Run multiple fastq.gz files with FastQC and yield single report?
updated 4.5 years ago by 43k • written 8.8 years ago by ★ 5.1k
1
vote
1
reply
13k
views
Answer: A: Blast 2.2.31+ "makeblastdb": where are my databases?
updated 4.5 years ago by 43k • written 8.8 years ago by ★ 5.1k
0
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1
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4.4k
views
Answer: A: Design arbitrary degenerate primers (with non-binding criteria)
updated 4.5 years ago by 43k • written 8.9 years ago by ★ 5.1k
0
votes
1
reply
4.6k
views
Comment: C: Using PhiX to estimate bisulfite conversion rate
updated 4.5 years ago by 43k • written 8.8 years ago by ★ 5.1k
1
vote
0
replies
2.2k
views
Comment: C: What is in your opinion the current state-of-the-art sequencing platform for gen
4.5 years ago by Antonio R. Franco ★ 5.1k
31
votes
16
replies
2.2k
views
8 follow
Forum: What is in your opinion the current state-of-the-art sequencing platform for genomic assembly (Nov 2019)
next-gen-sequencing assembly genome
updated 11 months ago by 43k • written 4.5 years ago by ★ 5.1k
0
votes
0
replies
2.2k
views
Answer: A: What is in your opinion the current state-of-the-art sequencing platform for gen
4.5 years ago by Antonio R. Franco ★ 5.1k
0
votes
1
reply
2.2k
views
Comment: C: What is in your opinion the current state-of-the-art sequencing platform for gen
4.5 years ago by Antonio R. Franco ★ 5.1k
0
votes
1
reply
2.2k
views
Comment: C: What is in your opinion the current state-of-the-art sequencing platform for gen
4.5 years ago by Antonio R. Franco ★ 5.1k
0
votes
3
replies
2.2k
views
Comment: A: What is in your opinion the current state-of-the-art sequencing platform for gen
4.5 years ago by Antonio R. Franco ★ 5.1k
1
vote
1
reply
2.0k
views
Comment: C: RNAseq differential expression analysis : no significative FDR but significative
4.5 years ago by Antonio R. Franco ★ 5.1k
0
votes
0
replies
2.0k
views
Comment: C: RNAseq differential expression analysis : no significative FDR but significative
4.5 years ago by Antonio R. Franco ★ 5.1k
0
votes
0
replies
4.9k
views
Comment: C: Extracting discordant Pairs
4.5 years ago by Antonio R. Franco ★ 5.1k
2
votes
0
replies
4.7k
views
Answer: A: edgeR gives no DE genes <0.05 FDR
4.6 years ago by Antonio R. Franco ★ 5.1k
0
votes
0
replies
1.0k
views
Comment: C: Galaxy DE lncRNA analysis pipeline
4.6 years ago by Antonio R. Franco ★ 5.1k
2
votes
1
reply
6.5k
views
Answer: A: TPM or FPKM for single cell RNA seq experiment ?
4.6 years ago by Antonio R. Franco ★ 5.1k
0
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0
replies
1.1k
views
Comment: C: neanderthals VCF file
4.6 years ago by Antonio R. Franco ★ 5.1k
0
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0
replies
2.0k
views
Answer: A: How to process Illumina MiSeq paired-end reads for analysis
4.7 years ago by Antonio R. Franco ★ 5.1k
0
votes
1
reply
1.1k
views
Answer: A: neanderthals VCF file
4.7 years ago by Antonio R. Franco ★ 5.1k
2
votes
1
reply
1.6k
views
Answer: A: When I run the tophat, the following error is given to me. How can I fix this er
4.7 years ago by Antonio R. Franco ★ 5.1k
1
vote
0
replies
2.6k
views
Answer: A: How can I compare two reference genome
5.0 years ago by Antonio R. Franco ★ 5.1k
2
votes
1
reply
16k
views
Answer: A: R - removing column names from matrix
updated 5.1 years ago by 43k • written 8.3 years ago by ★ 5.1k
2
votes
1
reply
16k
views
Comment: C: R - removing column names from matrix
updated 5.1 years ago by 43k • written 8.3 years ago by ★ 5.1k
2
votes
1
reply
16k
views
Comment: C: R - removing column names from matrix
updated 5.1 years ago by 43k • written 8.3 years ago by ★ 5.1k
1
vote
0
replies
2.9k
views
Answer: A: Integrating DMR data
5.1 years ago by Antonio R. Franco ★ 5.1k
0
votes
0
replies
7.7k
views
Answer: A: Any Free Software Similar To Sequencher?
5.1 years ago by Antonio R. Franco ★ 5.1k
0
votes
1
reply
1.9k
views
Answer: A: How to remove the contaminant reads from metagenome sequencing
5.2 years ago by Antonio R. Franco ★ 5.1k
2
votes
0
replies
3.1k
views
Answer: A: How to join DESeq2 object "res" to the gene annotation with dplyr?
5.2 years ago by Antonio R. Franco ★ 5.1k
0
votes
1
reply
1.2k
views
Comment: C: How to remove bam files that don't contain matching reads
5.2 years ago by Antonio R. Franco ★ 5.1k
0
votes
0
replies
2.6k
views
Comment: C: Difficulty in Host removal by Bowtie2,samtools and bedtools
5.2 years ago by Antonio R. Franco ★ 5.1k
1
vote
0
replies
2.6k
views
Answer: A: Difficulty in Host removal by Bowtie2,samtools and bedtools
5.2 years ago by Antonio R. Franco ★ 5.1k
1
vote
0
replies
206k
views
Comment: C: How To Update R In Ubuntu ?
updated 5.2 years ago by 43k • written 8.0 years ago by ★ 5.1k
0
votes
1
reply
7.1k
views
Comment: C: normalization with DEseq2
updated 5.3 years ago by 43k • written 8.6 years ago by ★ 5.1k
0
votes
1
reply
7.1k
views
Comment: C: normalization with DEseq2
updated 5.3 years ago by 43k • written 8.6 years ago by ★ 5.1k
1
vote
1
reply
7.1k
views
Comment: C: normalization with DEseq2
updated 5.3 years ago by 43k • written 8.6 years ago by ★ 5.1k
682 results • Page 4 of 14
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