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Comment: C: Why Wilcox.test keep giving (p-val = 0.1) even when there is significant differe
4.2 years ago by Constantine ▴ 290
3
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2
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2.1k
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Answer: A: Why Wilcox.test keep giving (p-val = 0.1) even when there is significant differe
4.2 years ago by Constantine ▴ 290
0
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0
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7.7k
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Answer: A: Stuck creating reference genome with STAR
updated 4.3 years ago by 43k • written 8.3 years ago by ▴ 290
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0
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7.1k
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Answer: A: Human transcriptome reference for RNASeq analysis
updated 4.4 years ago by 43k • written 8.4 years ago by ▴ 290
3
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2
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8.7k
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Answer: A: Pearson Correlation test between two Chip-Seq data sets
updated 4.4 years ago by 43k • written 8.4 years ago by ▴ 290
6
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5
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2.9k
views
H3K4me3 occupancy visualisation
ChIP-Seq
updated 19 months ago by 43k • written 8.6 years ago by ▴ 290
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0
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3.8k
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Comment: C: MNase-seq / fragment size selection
5.3 years ago by Constantine ▴ 290
5
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0
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2.4k
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Answer: A: MS Bioinformatics Project
6.0 years ago by Constantine ▴ 290
0
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0
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4.0k
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Answer: A: RNA-Seq time course DESeq2 analysis
6.7 years ago by Constantine ▴ 290
1
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0
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13k
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Comment: C: extract small heatmap from big one deeptools
7.2 years ago by Constantine ▴ 290
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1
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13k
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Comment: C: extract small heatmap from big one deeptools
7.2 years ago by Constantine ▴ 290
2
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1
reply
13k
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Answer: A: extract small heatmap from big one deeptools
7.2 years ago by Constantine ▴ 290
3
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1
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2.3k
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Answer: A: Quantification of repeats expression
7.2 years ago by Constantine ▴ 290
1
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0
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9.7k
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Comment: C: ChipSeq: merge bam file before peak calling
7.6 years ago by Constantine ▴ 290
3
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2
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9.7k
views
Answer: A: ChipSeq: merge bam file before peak calling
7.6 years ago by Constantine ▴ 290
8
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3
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7.9k
views
Deeptools sample scaling
ChIP-Seq sequencing deepTools
updated 20 months ago by 43k • written 8.4 years ago by ▴ 290
1
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1
reply
3.8k
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Comment: C: MNase-seq / fragment size selection
7.8 years ago by Constantine ▴ 290
0
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1
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3.8k
views
Comment: C: MNase-seq / fragment size selection
7.8 years ago by Constantine ▴ 290
5
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8
replies
3.8k
views
MNase-seq / fragment size selection
MNase-seq sequencing DNA
updated 7.8 years ago by 104k • written 7.8 years ago by ▴ 290
2
votes
1
reply
2.3k
views
MNase-Seq fragment size
sequencing nucleosome
updated 7.9 years ago by 104k • written 7.9 years ago by ▴ 290
13
votes
7
replies
21k
views
Error in creating BAM index
ChIP-Seq RNA-Seq
updated 17 months ago by 43k • written 9.4 years ago by ▴ 290
1
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0
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2.8k
views
Answer: A: Pipeline for RNA-seq analysis
8.3 years ago by Constantine ▴ 290
2
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2
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3.4k
views
Plotting Coverage - Strand specification
ChIP-Seq next-gen-sequencing
updated 20 months ago by 43k • written 8.4 years ago by ▴ 290
3
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2
replies
2.0k
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DE comparison between different softwares
RNA-Seq next-gen-sequencing
updated 20 months ago by 43k • written 8.5 years ago by ▴ 290
1
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0
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4.7k
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Comment: C: NGS plot error
8.5 years ago by Constantine ▴ 290
2
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3
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4.7k
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NGS plot error
ChIP-Seq next-gen-sequencing
updated 20 months ago by 43k • written 8.5 years ago by ▴ 290
0
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0
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3.2k
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Comment: C: ChIP-seq blacklisted regions (mouse)
8.5 years ago by Constantine ▴ 290
1
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2
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3.2k
views
ChIP-seq blacklisted regions (mouse)
ChIP-Seq next-gen-sequencing
updated 19 months ago by 43k • written 8.5 years ago by ▴ 290
0
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1
reply
2.8k
views
Comment: C: Intersecting ChIP/RNA-seq data
8.5 years ago by Constantine ▴ 290
0
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0
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2.8k
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Comment: C: Intersecting ChIP/RNA-seq data
8.5 years ago by Constantine ▴ 290
0
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2
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2.8k
views
Comment: Comment: Intersecting ChIP/RNA-seq data
updated 19 months ago by 43k • written 8.5 years ago by ▴ 290
0
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1
reply
2.8k
views
Comment: Comment: Intersecting ChIP/RNA-seq data
updated 19 months ago by 43k • written 8.5 years ago by ▴ 290
8
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13
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2.8k
views
Intersecting ChIP/RNA-seq data
RNA-Seq ChIP-Seq
updated 19 months ago by 43k • written 8.5 years ago by ▴ 290
0
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1
reply
2.8k
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Comment: C: Intersecting ChIP/RNA-seq data
8.5 years ago by Constantine ▴ 290
0
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1
reply
3.0k
views
Comment: Comment: Creating a matrix for edgeR/limma import
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 290
1
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5
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3.0k
views
Creating a matrix for edgeR/limma import
RNA-Seq R
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 290
0
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0
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3.0k
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Comment: Comment: Creating a matrix for edgeR/limma import
updated 2.0 years ago by 43k • written 9.2 years ago by ▴ 290
3
votes
4
replies
3.7k
views
IGV browser error
sequencing ChIP-Seq RNA-Seq
updated 2.0 years ago by 43k • written 9.3 years ago by ▴ 290
0
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0
replies
21k
views
Comment: C: Error in creating BAM index
9.4 years ago by Constantine ▴ 290
0
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0
replies
21k
views
Comment: Comment: Error in creating BAM index
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 290
0
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0
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3.1k
views
Comment: C: Error in importing BAM files
9.4 years ago by Constantine ▴ 290
1
vote
2
replies
3.1k
views
Error in importing BAM files
ChIP-Seq
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 290
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