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0
votes
3
replies
880
views
probability of two samples sharing a SNP by error
gwas snp illumina
updated 11 months ago by 43k • written 2.6 years ago by ▴ 80
4
votes
23
replies
9.4k
views
snpEFF chr not found error bacterial genome
snpeff SNP annotation
updated 2.1 years ago by 43k • written 9.3 years ago by ▴ 80
0
votes
0
replies
672
views
Bacterial population reconstruction
haplotype phase phasing population
3.8 years ago by SemiQuant ▴ 80
11
votes
19
replies
4.9k
views
Bacterial GWAS analysis?
genome gwas bacteria
updated 15 months ago by 43k • written 9.0 years ago by ▴ 80
1
vote
4
replies
1.8k
views
Trimming fastq up until a sequence
trimming fastq sequencing
4.2 years ago by SemiQuant ▴ 80
0
votes
2
replies
2.6k
views
UMI read consensus calling
next-gen umi unique molecular identifier nanopore
updated 4.2 years ago by 19k • written 4.2 years ago by ▴ 80
1
vote
2
replies
857
views
Subset (reduce) bam to contain only variant containing reads
sequencing bam alignment samtools
4.4 years ago by SemiQuant ▴ 80
23
votes
8
replies
20k
views
7 follow
Addin gene information to VCF file
SNP next-gen annotation variant
updated 18 months ago by 43k • written 9.4 years ago by ▴ 80
2
votes
1
reply
3.3k
views
How are indels and 'unknown' bases treated in ML phlogenetic tree programs?
RaxMl phylogenetics
updated 14 months ago by 43k • written 9.0 years ago by ▴ 80
0
votes
2
replies
4.8k
views
GATK variant recal malformed vcf
VCF GATK
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 80
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