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Sanger Imputation Service - The input file sanity check failed
bcftools Imputation VCF Sanger
updated 13 months ago by 41k • written 8.3 years ago by ▴ 580
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5.4k
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Answer: Answer: Plink extract SNPs from .ped file using ID
updated 13 months ago by 41k • written 8.3 years ago by ▴ 580
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9.6k
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Comment: Comment: How to remove batch effect from RNA-seq data?
updated 12 months ago by 41k • written 8.4 years ago by ▴ 580
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1
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9.6k
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Comment: Comment: How to remove batch effect from RNA-seq data?
updated 12 months ago by 41k • written 8.4 years ago by ▴ 580
6
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4
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9.6k
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How to remove batch effect from RNA-seq data?
combat RNA-Seq SVA DEseq2
updated 12 months ago by 41k • written 8.4 years ago by ▴ 580
2
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0
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2.2k
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Answer: Answer: Which chromosome a gene belongs to, in human?
updated 11 months ago by 41k • written 8.4 years ago by ▴ 580
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45k
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Comment: C: PLINK: merge .bed files
8.4 years ago by alesssia ▴ 580
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2.8k
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Comment: Comment: Find LD blocks
updated 11 months ago by 41k • written 8.4 years ago by ▴ 580
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3.7k
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Comment: Comment: Large tab-delimited table of SNP data, how to filter out some rows based on rsID
updated 11 months ago by 41k • written 8.4 years ago by ▴ 580
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0
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2.8k
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Answer: A: Find LD blocks
8.4 years ago by alesssia ▴ 580
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0
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2.4k
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Comment: C: Regions of the genome that may include CNVs
8.4 years ago by alesssia ▴ 580
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1
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2.7k
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Comment: Comment: Creating snpmatrix object from a flat file
updated 11 months ago by 41k • written 8.5 years ago by ▴ 580
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0
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3.6k
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Comment: Comment: Need good way to run a Principle Component Analysis on SNP data
updated 11 months ago by 41k • written 8.5 years ago by ▴ 580
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1
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2.4k
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Comment: C: Regions of the genome that may include CNVs
8.5 years ago by alesssia ▴ 580
1
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4
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2.4k
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Regions of the genome that may include CNVs
UCSC CNV
updated 11 months ago by 41k • written 8.5 years ago by ▴ 580
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0
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8.7k
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Comment: Comment: Coding genotypes from nucleotides to 0/1/2 in R.
updated 11 months ago by 41k • written 8.5 years ago by ▴ 580
2
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2
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8.7k
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Answer: Answer: Coding genotypes from nucleotides to 0/1/2 in R.
updated 11 months ago by 41k • written 8.5 years ago by ▴ 580
1
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1
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8.7k
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Comment: Comment: Coding genotypes from nucleotides to 0/1/2 in R.
updated 11 months ago by 41k • written 8.5 years ago by ▴ 580
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0
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3.4k
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Comment: C: how to convert 012 data to ACTG data with plink?
8.5 years ago by alesssia ▴ 580
0
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1
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3.4k
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Answer: Answer: how to convert 012 data to ACTG data with plink?
updated 10 months ago by 41k • written 8.5 years ago by ▴ 580
4
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1
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1.2k
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Answer: Answer: re-installation of R packages
updated 10 months ago by 41k • written 8.5 years ago by ▴ 580
6
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1
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14k
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Answer: Answer: R programming, concatenate or combine all the column contents
updated 18 months ago by 41k • written 8.5 years ago by ▴ 580
2
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0
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1.7k
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Comment: Comment: Package for checking differential expression of gene
updated 10 months ago by 41k • written 8.5 years ago by ▴ 580
2
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1
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1.7k
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Answer: Answer: Package for checking differential expression of gene
updated 10 months ago by 41k • written 8.5 years ago by ▴ 580
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1
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2.6k
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Comment: Comment: how to use dbSNP
updated 10 months ago by 41k • written 8.5 years ago by ▴ 580
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2
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2.6k
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Comment: C: how to use dbSNP
8.5 years ago by alesssia ▴ 580
2
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1
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2.6k
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Answer: Answer: how to use dbSNP
updated 10 months ago by 41k • written 8.5 years ago by ▴ 580
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0
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2.4k
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Comment: Comment: Bio-informatic database for SNP-Blood pressure association
updated 10 months ago by 41k • written 8.5 years ago by ▴ 580
2
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0
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4.5k
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Answer: Answer: Need advice: I want to display a heatmap of gene expression based on a dendrogra
updated 10 months ago by 41k • written 8.6 years ago by ▴ 580
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0
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1.6k
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Is it possible to extract the C component of the ACE model from an AE model?
GCTA Mx ACE AE twin
updated 9 months ago by 41k • written 8.6 years ago by ▴ 580
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0
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4.8k
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Comment: C: PED & MAP file extension
8.6 years ago by alesssia ▴ 580
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1
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4.8k
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Comment: Comment: PED & MAP file extension
updated 9 months ago by 41k • written 8.6 years ago by ▴ 580
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0
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3.4k
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Comment: Comment: Starting up with PLINK
updated 17 months ago by 41k • written 8.6 years ago by ▴ 580
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1
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2.1k
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Comment: C: Complex clustering of RNA-seq data
8.6 years ago by alesssia ▴ 580
1
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1
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3.7k
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Answer: A: Get Gene Location Data
8.6 years ago by alesssia ▴ 580
1
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1
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6.7k
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Answer: Answer: Retrieve a subset of SNPs in Plink
updated 17 months ago by 41k • written 8.6 years ago by ▴ 580
0
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1
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1.8k
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Answer: Answer: how can one find novel drugs names?
updated 18 months ago by 41k • written 8.7 years ago by ▴ 580
0
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1
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2.9k
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Answer: Answer: List of causal variants for autoimmune diseases
updated 17 months ago by 41k • written 8.7 years ago by ▴ 580
1
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0
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4.3k
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Answer: Answer: R program (bioconductor)
updated 18 months ago by 41k • written 8.7 years ago by ▴ 580
0
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0
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2.7k
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DESeq2 - Normalisation factors
DESeq2 normalisation RNA-Seq
updated 18 months ago by 41k • written 8.7 years ago by ▴ 580
0
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0
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3.7k
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Comment: C: DESeq2: invalid class “GRangesList” object
8.7 years ago by alesssia ▴ 580
0
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1
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3.7k
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Comment: C: DESeq2: invalid class “GRangesList” object
8.7 years ago by alesssia ▴ 580
2
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7
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3.7k
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DESeq2: invalid class “GRangesList” object
DESeq2 bioconductor r
updated 18 months ago by 41k • written 8.7 years ago by ▴ 580
0
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1
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3.7k
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Comment: Comment: DESeq2: invalid class “GRangesList” object
updated 18 months ago by 41k • written 8.7 years ago by ▴ 580
0
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0
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3.2k
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Comment: C: RNA-Seq: using GLMM to detect differentially expressed genes
8.8 years ago by alesssia ▴ 580
4
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2
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3.2k
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RNA-Seq: using GLMM to detect differentially expressed genes
GLMM differential-expression RNA-Seq
updated 19 months ago by 41k • written 8.8 years ago by ▴ 580
0
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1
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2.3k
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Comment: Comment: DESeq2: can I correct for relatedness when using data from multiplex families?
updated 19 months ago by 41k • written 8.8 years ago by ▴ 580
0
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1
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2.3k
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Comment: Comment: DESeq2: can I correct for relatedness when using data from multiplex families?
updated 19 months ago by 41k • written 8.8 years ago by ▴ 580
7
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13
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3.9k
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DESeq2: can I correct for relatedness when using data from multiplex families?
DESeq2 RNA-Seq Multiplex-families
updated 19 months ago by 41k • written 8.8 years ago by ▴ 580
0
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0
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6.5k
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Comment: C: lmekin -- Model fails because of the Cholesky decomposition -- but chol works!
8.8 years ago by alesssia ▴ 580
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