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477
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Answer: Answer: How to find GO function from GEO2R results
5 months ago by mark.ziemann ★ 1.9k
1
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1
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434
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Answer: Answer: transcriptomic data for molecular subtyping
5 months ago by mark.ziemann ★ 1.9k
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0
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301
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Answer: Answer: Aneuploidy analysis from WGS
5 months ago by mark.ziemann ★ 1.9k
1
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2
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913
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Answer: Answer: Geo2R troubleshooting
5 months ago by mark.ziemann ★ 1.9k
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1
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597
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Answer: Answer: Simulation of gene level methylation data
5 months ago by mark.ziemann ★ 1.9k
1
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1
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751
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Answer: Answer: Methods to analyze EM-seq data
5 months ago by mark.ziemann ★ 1.9k
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0
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478
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Answer: Answer: mitch analysis report priority by standard deviation
6 months ago by mark.ziemann ★ 1.9k
1
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0
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312
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Answer: Answer: How to get differntial Protein expression from protein abundance?
6 months ago by mark.ziemann ★ 1.9k
0
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0
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792
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Answer: Answer: Biological replicates in RNA-seq
14 months ago by mark.ziemann ★ 1.9k
0
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1
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581
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Answer: Answer: clusterprofile enrichment analysis
14 months ago by mark.ziemann ★ 1.9k
3
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1
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1.0k
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Answer: Answer: What exactly are unmappable regions?
18 months ago by mark.ziemann ★ 1.9k
3
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1
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1.9k
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Answer: Answer: gseGO by fold-change returns errors
18 months ago by mark.ziemann ★ 1.9k
0
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0
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821
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Answer: Answer: Combining multiple datasets increases the fgsea p-value
19 months ago by mark.ziemann ★ 1.9k
4
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0
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1.5k
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Answer: Answer: How to create a new gene signature from RNAseq data
24 months ago by mark.ziemann ★ 1.9k
1
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1
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681
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Answer: Answer: Horizontal Gene Tranfer/Recombination
2.0 years ago by mark.ziemann ★ 1.9k
3
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1
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666
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Answer: Answer: Removing or Setting pairs to NA based on conditions in another data frame (R)
2.0 years ago by mark.ziemann ★ 1.9k
1
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1
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792
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Answer: Answer: sequence error
2.0 years ago by mark.ziemann ★ 1.9k
2
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0
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1.3k
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Answer: Answer: GC content calculation in percentage
2.0 years ago by mark.ziemann ★ 1.9k
0
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0
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606
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Answer: Answer: Pathway Enrichment Analysis according to tumor mutation burden.
2.0 years ago by mark.ziemann ★ 1.9k
3
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2
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1.6k
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Answer: Answer: How can I do an inner_join with multiple .csv files on the linux command line?
2.0 years ago by mark.ziemann ★ 1.9k
2
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1
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823
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Answer: Answer: DNA sequencing from cord blood stem cells
2.0 years ago by mark.ziemann ★ 1.9k
2
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0
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690
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Answer: Answer: Accessing particular gene set with msigdbr on R
2.0 years ago by mark.ziemann ★ 1.9k
4
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1
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824
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Answer: Answer: Repeats/Transposons finding
2.0 years ago by mark.ziemann ★ 1.9k
0
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1
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631
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Answer: Answer: How to get gene expression data from list of gene
2.0 years ago by mark.ziemann ★ 1.9k
1
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0
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445
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Answer: Answer: Bacterial small-rna analysis
2.0 years ago by mark.ziemann ★ 1.9k
2
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0
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628
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Answer: Answer: GO Term Analysis in scRNASeq data with low number of genes expressed
2.0 years ago by mark.ziemann ★ 1.9k
1
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0
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521
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Answer: Answer: How to identify the genome build a dataset was aligned too?
2.0 years ago by mark.ziemann ★ 1.9k
0
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0
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1.2k
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Answer: A: Number of replicates in each group in RNA seq
3.8 years ago by mark.ziemann ★ 1.9k
1
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0
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890
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Answer: A: CAST/EiJ mouse strain Reference Transcriptome (do we have one? if not, how to bu
3.8 years ago by mark.ziemann ★ 1.9k
0
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0
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1.5k
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Answer: A: Location of Genes on Chromosome
4.5 years ago by mark.ziemann ★ 1.9k
0
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1
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6.1k
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Answer: A: /bin/bash/ command not found
4.5 years ago by mark.ziemann ★ 1.9k
2
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1
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4.2k
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Answer: A: RNA seq with 2 biological replicates
4.5 years ago by mark.ziemann ★ 1.9k
1
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0
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1.6k
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Answer: A: Safe to convert entrez gene id to ensembl gene id
4.5 years ago by mark.ziemann ★ 1.9k
0
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0
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1.4k
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Answer: A: How to decide the parameters and parameter values when running ChIP-seq Peak Cal
4.5 years ago by mark.ziemann ★ 1.9k
2
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0
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663
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Answer: A: Primer Design Validation
4.5 years ago by mark.ziemann ★ 1.9k
6
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0
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25k
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Answer: A: BWA MEM Algorithm
updated 4.5 years ago by 44k • written 9.2 years ago by ★ 1.9k
1
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0
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1.8k
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Answer: A: Software to count gene loss in batch
updated 4.7 years ago by 44k • written 8.7 years ago by ★ 1.9k
0
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0
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3.0k
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Answer: A: Is there an online resource with freely available transcriptomes data from?
4.7 years ago by mark.ziemann ★ 1.9k
1
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0
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785
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Answer: A: Is BWT algorithm suitable for all types of alignment task?
4.7 years ago by mark.ziemann ★ 1.9k
1
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1
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3.2k
views
Answer: A: How to discover new mutations in a derived strain relative to a reference genome
updated 4.7 years ago by 44k • written 9.0 years ago by ★ 1.9k
0
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0
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5.5k
views
Answer: A: counting reads with featureCounts - uniquely assign reads to transcripts
updated 4.7 years ago by 44k • written 9.1 years ago by ★ 1.9k
2
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1
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2.7k
views
Answer: Answer: Help simulating RRBS reads
updated 18 months ago by 44k • written 9.1 years ago by ★ 1.9k
1
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0
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15k
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Answer: A: Extracting specific FASTA sequences from a complex FASTA file
updated 4.8 years ago by 44k • written 9.4 years ago by ★ 1.9k
5
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1
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4.7k
views
Answer: A: fgsea tutorial issue with BiocParallel
5.5 years ago by mark.ziemann ★ 1.9k
1
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0
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1.9k
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Answer: A: Meta-Analysis p-value combining and adjusting
5.9 years ago by mark.ziemann ★ 1.9k
0
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1
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1.4k
views
Answer: A: Obtaining DEGs for bacterial RNA-sequencing study (levels of UV exposure)
6.4 years ago by mark.ziemann ★ 1.9k
2
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0
replies
3.4k
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Answer: A: Why do ribo-seq sequencing data have only a small proportion of uniquely mapped
6.7 years ago by mark.ziemann ★ 1.9k
2
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1
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3.4k
views
Answer: A: Why do ribo-seq sequencing data have only a small proportion of uniquely mapped
6.7 years ago by mark.ziemann ★ 1.9k
3
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0
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2.2k
views
Answer: A: Looking for publicly available dataset.
6.7 years ago by mark.ziemann ★ 1.9k
2
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0
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2.1k
views
Answer: A: Download ENCODE Project BED files using REST API
7.0 years ago by mark.ziemann ★ 1.9k
110 results • Page 1 of 3
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