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Showing :
answers
2
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0
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386
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Answer:
Answer: How to find GO function from GEO2R results
9 weeks ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
330
views
Answer:
Answer: transcriptomic data for molecular subtyping
9 weeks ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
206
views
Answer:
Answer: Aneuploidy analysis from WGS
9 weeks ago by
mark.ziemann
★ 1.9k
1
vote
2
replies
629
views
Answer:
Answer: Geo2R troubleshooting
10 weeks ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
446
views
Answer:
Answer: Simulation of gene level methylation data
10 weeks ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
523
views
Answer:
Answer: Methods to analyze EM-seq data
12 weeks ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
425
views
Answer:
Answer: mitch analysis report priority by standard deviation
3 months ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
248
views
Answer:
Answer: How to get differntial Protein expression from protein abundance?
3 months ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
695
views
Answer:
Answer: Biological replicates in RNA-seq
11 months ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
464
views
Answer:
Answer: clusterprofile enrichment analysis
11 months ago by
mark.ziemann
★ 1.9k
3
votes
1
reply
867
views
Answer:
Answer: What exactly are unmappable regions?
15 months ago by
mark.ziemann
★ 1.9k
2
votes
1
reply
1.6k
views
Answer:
Answer: gseGO by fold-change returns errors
15 months ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
727
views
Answer:
Answer: Combining multiple datasets increases the fgsea p-value
16 months ago by
mark.ziemann
★ 1.9k
4
votes
0
replies
1.3k
views
Answer:
Answer: How to create a new gene signature from RNAseq data
20 months ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
615
views
Answer:
Answer: Horizontal Gene Tranfer/Recombination
21 months ago by
mark.ziemann
★ 1.9k
3
votes
1
reply
605
views
Answer:
Answer: Removing or Setting pairs to NA based on conditions in another data frame (R)
21 months ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
722
views
Answer:
Answer: sequence error
21 months ago by
mark.ziemann
★ 1.9k
2
votes
0
replies
1.2k
views
Answer:
Answer: GC content calculation in percentage
21 months ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
552
views
Answer:
Answer: Pathway Enrichment Analysis according to tumor mutation burden.
21 months ago by
mark.ziemann
★ 1.9k
3
votes
2
replies
1.5k
views
Answer:
Answer: How can I do an inner_join with multiple .csv files on the linux command line?
21 months ago by
mark.ziemann
★ 1.9k
2
votes
1
reply
715
views
Answer:
Answer: DNA sequencing from cord blood stem cells
21 months ago by
mark.ziemann
★ 1.9k
2
votes
0
replies
579
views
Answer:
Answer: Accessing particular gene set with msigdbr on R
21 months ago by
mark.ziemann
★ 1.9k
4
votes
1
reply
708
views
Answer:
Answer: Repeats/Transposons finding
21 months ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
571
views
Answer:
Answer: How to get gene expression data from list of gene
21 months ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
381
views
Answer:
Answer: Bacterial small-rna analysis
21 months ago by
mark.ziemann
★ 1.9k
2
votes
0
replies
559
views
Answer:
Answer: GO Term Analysis in scRNASeq data with low number of genes expressed
21 months ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
475
views
Answer:
Answer: How to identify the genome build a dataset was aligned too?
21 months ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
1.1k
views
Answer:
A: Number of replicates in each group in RNA seq
3.6 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
842
views
Answer:
A: CAST/EiJ mouse strain Reference Transcriptome (do we have one? if not, how to bu
3.6 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
1.4k
views
Answer:
A: Location of Genes on Chromosome
4.2 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
5.8k
views
Answer:
A: /bin/bash/ command not found
4.2 years ago by
mark.ziemann
★ 1.9k
2
votes
1
reply
3.9k
views
Answer:
A: RNA seq with 2 biological replicates
4.2 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
1.5k
views
Answer:
A: Safe to convert entrez gene id to ensembl gene id
4.2 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
1.3k
views
Answer:
A: How to decide the parameters and parameter values when running ChIP-seq Peak Cal
4.2 years ago by
mark.ziemann
★ 1.9k
2
votes
0
replies
623
views
Answer:
A: Primer Design Validation
4.2 years ago by
mark.ziemann
★ 1.9k
6
votes
0
replies
25k
views
Answer:
A: BWA MEM Algorithm
updated 4.3 years ago by
Ram
43k • written 9.0 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
1.8k
views
Answer:
A: Software to count gene loss in batch
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
2.9k
views
Answer:
A: Is there an online resource with freely available transcriptomes data from?
4.4 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
734
views
Answer:
A: Is BWT algorithm suitable for all types of alignment task?
4.4 years ago by
mark.ziemann
★ 1.9k
1
vote
1
reply
3.1k
views
Answer:
A: How to discover new mutations in a derived strain relative to a reference genome
updated 4.5 years ago by
Ram
43k • written 8.8 years ago by
mark.ziemann
★ 1.9k
0
votes
0
replies
5.4k
views
Answer:
A: counting reads with featureCounts - uniquely assign reads to transcripts
updated 4.5 years ago by
Ram
43k • written 8.8 years ago by
mark.ziemann
★ 1.9k
2
votes
1
reply
2.6k
views
Answer:
Answer: Help simulating RRBS reads
updated 15 months ago by
Ram
43k • written 8.9 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
14k
views
Answer:
A: Extracting specific FASTA sequences from a complex FASTA file
updated 4.5 years ago by
Ram
43k • written 9.2 years ago by
mark.ziemann
★ 1.9k
5
votes
1
reply
4.6k
views
Answer:
A: fgsea tutorial issue with BiocParallel
5.2 years ago by
mark.ziemann
★ 1.9k
1
vote
0
replies
1.8k
views
Answer:
A: Meta-Analysis p-value combining and adjusting
5.6 years ago by
mark.ziemann
★ 1.9k
0
votes
1
reply
1.3k
views
Answer:
A: Obtaining DEGs for bacterial RNA-sequencing study (levels of UV exposure)
6.2 years ago by
mark.ziemann
★ 1.9k
2
votes
0
replies
3.3k
views
Answer:
A: Why do ribo-seq sequencing data have only a small proportion of uniquely mapped
6.4 years ago by
mark.ziemann
★ 1.9k
2
votes
1
reply
3.3k
views
Answer:
A: Why do ribo-seq sequencing data have only a small proportion of uniquely mapped
6.4 years ago by
mark.ziemann
★ 1.9k
3
votes
0
replies
2.0k
views
Answer:
A: Looking for publicly available dataset.
6.4 years ago by
mark.ziemann
★ 1.9k
2
votes
0
replies
2.0k
views
Answer:
A: Download ENCODE Project BED files using REST API
6.8 years ago by
mark.ziemann
★ 1.9k
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