Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
3
votes
1
reply
4.1k
views
Answer: Answer: Limma Differential Expression with Duplicate Correlation
3.0 years ago by i.sudbery 22k
0
votes
0
replies
1.4k
views
Comment: Comment: Issue with DESeq2 gene outlier detection when having multiple groups
3.0 years ago by i.sudbery 22k
0
votes
0
replies
658
views
Comment: Comment: command line for umi_tools count_tab
3.0 years ago by i.sudbery 22k
1
vote
1
reply
1.4k
views
Answer: Answer: Issue with DESeq2 gene outlier detection when having multiple groups
3.0 years ago by i.sudbery 22k
0
votes
0
replies
1.8k
views
Answer: Answer: Is low N in-vivo research a blind spot for RNA-seq?
3.1 years ago by i.sudbery 22k
0
votes
0
replies
815
views
Answer: Answer: How do I filter out reads where Read 2 doesn't map to the end of a fasta sequenc
3.1 years ago by i.sudbery 22k
1
vote
0
replies
1.9k
views
Comment: Comment: How to choose one TSS for every gene using Gencode annotation file?
3.1 years ago by i.sudbery 22k
2
votes
0
replies
1.2k
views
Answer: Answer: Statistical exams in case of low replicate number in RNAseq analysis
3.1 years ago by i.sudbery 22k
1
vote
0
replies
1.4k
views
Comment: Comment: Collecting samples from different studies for RNASeq analysis.
3.1 years ago by i.sudbery 22k
0
votes
1
reply
1.4k
views
Comment: Comment: Collecting samples from different studies for RNASeq analysis.
3.1 years ago by i.sudbery 22k
0
votes
1
reply
1.4k
views
Comment: Comment: Collecting samples from different studies for RNASeq analysis.
3.1 years ago by i.sudbery 22k
0
votes
0
replies
2.0k
views
Comment: Comment: Gene types to use for RNA counts case-control
3.1 years ago by i.sudbery 22k
0
votes
0
replies
2.0k
views
Comment: Comment: Gene types to use for RNA counts case-control
3.1 years ago by i.sudbery 22k
1
vote
2
replies
2.0k
views
Comment: Comment: Gene types to use for RNA counts case-control
3.1 years ago by i.sudbery 22k
3
votes
2
replies
2.2k
views
Answer: Answer: Fasta file is not converting properly to Indexed Fasta File
3.1 years ago by i.sudbery 22k
1
vote
2
replies
3.8k
views
Comment: Comment: Why isn't GWAS used in oncology?
3.1 years ago by i.sudbery 22k
1
vote
0
replies
1.3k
views
Answer: Answer: Is the promoter part of whole of gene in the UCSC database?
3.1 years ago by i.sudbery 22k
0
votes
1
reply
1.3k
views
Comment: Comment: Is the promoter part of whole of gene in the UCSC database?
3.1 years ago by i.sudbery 22k
2
votes
0
replies
3.8k
views
Comment: Comment: Why isn't GWAS used in oncology?
3.1 years ago by i.sudbery 22k
2
votes
0
replies
852
views
Answer: Answer: A method to find if a variant is Genomic or an RNA-Editing variant
3.1 years ago by i.sudbery 22k
4
votes
0
replies
1.7k
views
Answer: Answer: Modelling vs removing effects from confounding variables and their uses for down
3.1 years ago by i.sudbery 22k
1
vote
1
reply
1.1k
views
Comment: Comment: Why a gene in UCSC has different positions?
3.2 years ago by i.sudbery 22k
2
votes
2
replies
2.7k
views
Answer: Answer: Multiple Testing Correction for GO Terms
3.2 years ago by i.sudbery 22k
0
votes
0
replies
1.1k
views
Answer: Answer: A question for using data in ENCODE polyA plus RNA-seq for exon level expression
3.2 years ago by i.sudbery 22k
1
vote
0
replies
2.7k
views
Comment: Comment: DEXSeq - No Exon Counts
3.2 years ago by i.sudbery 22k
1
vote
1
reply
1.4k
views
Comment: Comment: Differential Expression Analysis over time treatment
3.2 years ago by i.sudbery 22k
1
vote
0
replies
841
views
Answer: Answer: What is retained from original vector construct/plasmid after RNA-sequencing?
3.2 years ago by i.sudbery 22k
0
votes
1
reply
1.4k
views
Comment: Comment: Differential Expression Analysis over time treatment
3.2 years ago by i.sudbery 22k
2
votes
1
reply
1.4k
views
Answer: Answer: Differential Expression Analysis over time treatment
3.2 years ago by i.sudbery 22k
1
vote
1
reply
2.3k
views
Answer: Answer: Does RSEM ignore STAR's splice-aware nature?
3.2 years ago by i.sudbery 22k
0
votes
1
reply
2.4k
views
Comment: Comment: CPTA, TCGA, RNA seq, validation
3.2 years ago by i.sudbery 22k
0
votes
0
replies
990
views
Comment: Comment: How do we guarantee a sample is sequenced to a given depth?
3.2 years ago by i.sudbery 22k
1
vote
1
reply
2.4k
views
Answer: Answer: CPTA, TCGA, RNA seq, validation
3.2 years ago by i.sudbery 22k
0
votes
0
replies
2.3k
views
Comment: Comment: Is there any journal article to reference removeBatchEffect function from Limma?
3.2 years ago by i.sudbery 22k
5
votes
1
reply
2.3k
views
Answer: Answer: Is there any journal article to reference removeBatchEffect function from Limma?
3.2 years ago by i.sudbery 22k
6
votes
3
replies
4.7k
views
Forum: Best formats for storing large amounts of data for random access
file-formats databases
updated 3.2 years ago by 5.1k • written 3.2 years ago by 22k
3
votes
1
reply
1.4k
views
Answer: Answer: Biomart doe not convert between RefSeq and Ensembl Transcripts in GRCh37?
3.2 years ago by i.sudbery 22k
1
vote
0
replies
1.7k
views
Answer: Answer: Multiple exposure timelines (time-points) in one DESeq2 object or multiple DESeq
3.2 years ago by i.sudbery 22k
1
vote
1
reply
2.4k
views
Comment: Comment: Running salmon in alignment mode?
3.3 years ago by i.sudbery 22k
1
vote
0
replies
1.4k
views
Answer: Answer: Crossing Wires with GTF files
3.3 years ago by i.sudbery 22k
0
votes
1
reply
2.4k
views
Comment: Comment: Running salmon in alignment mode?
3.3 years ago by i.sudbery 22k
0
votes
1
reply
2.4k
views
Comment: Comment: Running salmon in alignment mode?
3.3 years ago by i.sudbery 22k
0
votes
1
reply
884
views
Comment: Comment: Evaluation of gene expression by the "2–∆∆Ct" method.
3.3 years ago by i.sudbery 22k
0
votes
0
replies
903
views
Answer: Answer: wgcna without clinical traits
3.3 years ago by i.sudbery 22k
2
votes
0
replies
1.4k
views
Answer: Answer: What are the best options for Isoform Switching Analysis in R?
3.4 years ago by i.sudbery 22k
0
votes
1
reply
3.1k
views
Comment: Comment: Kallisto and Salmon give different results
3.4 years ago by i.sudbery 22k
2
votes
1
reply
3.1k
views
Answer: Answer: Kallisto and Salmon give different results
3.4 years ago by i.sudbery 22k
2
votes
0
replies
844
views
Answer: Answer: how to find coordinates of 5prime and 3prime utr from transcriptome data generat
3.4 years ago by i.sudbery 22k
3
votes
0
replies
1.2k
views
Answer: Answer: RNA-seq data, normality test, stat test
3.4 years ago by i.sudbery 22k
0
votes
0
replies
1.0k
views
Comment: Comment: Correct model matrix design with R
3.4 years ago by i.sudbery 22k
1,719 results • Page 11 of 35
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6