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Comment: C: Unzipping SAM files
5.1 years ago by i.sudbery 22k
3
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1
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3.1k
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Comment: C: Hazard ratio for many genes (gene signature)
5.1 years ago by i.sudbery 22k
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3.1k
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Comment: C: How to fix extreme outliers not picked up by DESeq2?
5.1 years ago by i.sudbery 22k
1
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1
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3.1k
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Answer: A: How to fix extreme outliers not picked up by DESeq2?
5.1 years ago by i.sudbery 22k
1
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1
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3.1k
views
Comment: C: Hazard ratio for many genes (gene signature)
5.1 years ago by i.sudbery 22k
1
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1
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3.1k
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Answer: C: Hazard ratio for many genes (gene signature)
5.1 years ago by i.sudbery 22k
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2.1k
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Comment: C: Best practices in eQTL analysis
5.1 years ago by i.sudbery 22k
4
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3
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2.1k
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Best practices in eQTL analysis
RNA-Seq eQTL
updated 5.1 years ago by ▴ 260 • written 5.2 years ago by 22k
1
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0
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1.1k
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Comment: C: R package for GO-BP enrichment analysis with c(symbol, log2foldchange, pvalue)
5.1 years ago by i.sudbery 22k
6
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1
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3.7k
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Answer: A: Differentially expressed genes machine learning classifer
5.1 years ago by i.sudbery 22k
0
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1.1k
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Comment: C: Retrieve dataset from EMBL
5.1 years ago by i.sudbery 22k
1
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1
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1.1k
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Comment: C: Retrieve dataset from EMBL
5.1 years ago by i.sudbery 22k
2
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1
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4.8k
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Comment: C: Why does bioinformatics use a special format like a BAM file instead of a databa
5.1 years ago by i.sudbery 22k
1
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0
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3.6k
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Comment: C: BLAST configuration for siRNA off-target search
5.1 years ago by i.sudbery 22k
4
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1
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4.8k
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Answer: A: Why does bioinformatics use a special format like a BAM file instead of a databa
5.1 years ago by i.sudbery 22k
1
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1
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12k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.1 years ago by i.sudbery 22k
2
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0
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12k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.1 years ago by i.sudbery 22k
8
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0
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7.9k
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Answer: A: How p value is calculated in GSEA?
5.1 years ago by i.sudbery 22k
1
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1
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3.0k
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Answer: A: Reliability of gene expression with low exonic counts in bulk RNA-seq data
5.1 years ago by i.sudbery 22k
0
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1
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7.9k
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Comment: C: How p value is calculated in GSEA?
5.1 years ago by i.sudbery 22k
1
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1
reply
12k
views
Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.1 years ago by i.sudbery 22k
0
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0
replies
12k
views
Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.1 years ago by i.sudbery 22k
1
vote
1
reply
12k
views
Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.1 years ago by i.sudbery 22k
2
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0
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2.1k
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Comment: C: miRNA normalization workflow
5.1 years ago by i.sudbery 22k
1
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1
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1.4k
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Comment: C: Hypergeometric test on gene lists
5.1 years ago by i.sudbery 22k
0
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2
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1.3k
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Genotyping samples at a predetermined list of locations
SNP GATK Variants Genotyping
updated 5.1 years ago by ▴ 480 • written 5.1 years ago by 22k
2
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0
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12k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.1 years ago by i.sudbery 22k
3
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0
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4.9k
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Answer: A: file and directory management best practices
5.1 years ago by i.sudbery 22k
15
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2
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12k
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Answer: A: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.1 years ago by i.sudbery 22k
1
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0
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2.0k
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Answer: A: Genotype PCA from genotype matrix
5.1 years ago by i.sudbery 22k
5
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2
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2.0k
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Genotype PCA from genotype matrix
PCA SNP Genotype
5.1 years ago by i.sudbery 22k
5
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6
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2.2k
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RNAseq sample never as A in last base
RNA-Seq fastqc
updated 5.1 years ago by ▴ 20 • written 6.5 years ago by 22k
0
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0
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1.8k
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Comment: C: Assessing controls for RNASeq
5.1 years ago by i.sudbery 22k
0
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0
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1.8k
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Comment: C: Assessing controls for RNASeq
5.1 years ago by i.sudbery 22k
1
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1
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1.8k
views
Answer: A: Assessing controls for RNASeq
5.1 years ago by i.sudbery 22k
1
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0
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3.4k
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Comment: C: Annotation for gene-level analysis after stringtie
5.1 years ago by i.sudbery 22k
0
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1
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1.9k
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Comment: C: scRNAseq - DE
5.1 years ago by i.sudbery 22k
0
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1
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3.4k
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Comment: C: Annotation for gene-level analysis after stringtie
5.1 years ago by i.sudbery 22k
0
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1
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1.4k
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Comment: C: how to calculate p-value of Cuffdiff result?
5.1 years ago by i.sudbery 22k
0
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1
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1.1k
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Comment: C: RNA-Seq Star-Cuffdiff Pipeline error message after changing c parameter in cuffd
5.2 years ago by i.sudbery 22k
0
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1
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1.1k
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Answer: A: RNA-Seq Star-Cuffdiff Pipeline error message after changing c parameter in cuffd
5.2 years ago by i.sudbery 22k
0
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1
reply
8.4k
views
Comment: C: how to run Jupyter script on Slurm HPC
5.2 years ago by i.sudbery 22k
0
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1
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8.4k
views
Comment: C: how to run Jupyter script on Slurm HPC
5.2 years ago by i.sudbery 22k
2
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2
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8.4k
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Answer: A: how to run Jupyter script on Slurm HPC
5.2 years ago by i.sudbery 22k
0
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1
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1.3k
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Comment: C: correlation pearson and spearman PValue
5.2 years ago by i.sudbery 22k
2
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1
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3.0k
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Answer: C: Samtools faidx not printing reverse complement
5.2 years ago by i.sudbery 22k
1
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0
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3.5k
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Comment: C: Adding a UMI tag to the UMI sequences in FASTQ files
5.2 years ago by i.sudbery 22k
0
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0
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1.6k
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Comment: C: Too many RNAseq samples. What to do?
5.2 years ago by i.sudbery 22k
0
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0
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772
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Answer: A: Limma Differential Expression RNASeq, please help
5.2 years ago by i.sudbery 22k
2
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1
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1.6k
views
Comment: C: Too many RNAseq samples. What to do?
5.2 years ago by i.sudbery 22k
1,719 results • Page 20 of 35
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