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1
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Comment: C: Genes inhibiting each other's expression
5.2 years ago by i.sudbery 22k
1
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2
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1.8k
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Answer: A: Genes inhibiting each other's expression
5.2 years ago by i.sudbery 22k
11
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1
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17k
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Answer: A: Difference between padj and FDR
5.2 years ago by i.sudbery 22k
5
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4.7k
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Answer: A: Why are we assuming most genes are not differentially expressed?
updated 5.2 years ago by 45k • written 5.2 years ago by 22k
1
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4.7k
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Comment: C: Why are we assuming most genes are not differentially expressed?
5.2 years ago by i.sudbery 22k
1
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1
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1.6k
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Answer: A: HTseq feature count handling of transcripts with shared exons?
5.2 years ago by i.sudbery 22k
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1
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1.5k
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Comment: C: How reproducible is the DEG analysis?
5.2 years ago by i.sudbery 22k
1
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1.5k
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Answer: A: How reproducible is the DEG analysis?
5.2 years ago by i.sudbery 22k
2
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1
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1.5k
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Comment: C: How reproducible is the DEG analysis?
5.2 years ago by i.sudbery 22k
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1
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3.4k
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Comment: C: Unzipping SAM files
5.2 years ago by i.sudbery 22k
3
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1
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3.2k
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Comment: C: Hazard ratio for many genes (gene signature)
5.2 years ago by i.sudbery 22k
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3.3k
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Comment: C: How to fix extreme outliers not picked up by DESeq2?
5.2 years ago by i.sudbery 22k
1
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1
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3.3k
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Answer: A: How to fix extreme outliers not picked up by DESeq2?
5.2 years ago by i.sudbery 22k
1
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1
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3.2k
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Comment: C: Hazard ratio for many genes (gene signature)
5.2 years ago by i.sudbery 22k
1
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1
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3.2k
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Answer: C: Hazard ratio for many genes (gene signature)
5.2 years ago by i.sudbery 22k
0
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0
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2.2k
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Comment: C: Best practices in eQTL analysis
5.2 years ago by i.sudbery 22k
4
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3
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2.2k
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Best practices in eQTL analysis
RNA-Seq eQTL
updated 5.2 years ago by ▴ 260 • written 5.3 years ago by 22k
1
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1.2k
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Comment: C: R package for GO-BP enrichment analysis with c(symbol, log2foldchange, pvalue)
5.2 years ago by i.sudbery 22k
6
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1
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3.8k
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Answer: A: Differentially expressed genes machine learning classifer
5.2 years ago by i.sudbery 22k
0
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0
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1.2k
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Comment: C: Retrieve dataset from EMBL
5.2 years ago by i.sudbery 22k
1
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1
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1.2k
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Comment: C: Retrieve dataset from EMBL
5.2 years ago by i.sudbery 22k
2
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1
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5.1k
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Comment: C: Why does bioinformatics use a special format like a BAM file instead of a databa
5.2 years ago by i.sudbery 22k
1
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0
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3.8k
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Comment: C: BLAST configuration for siRNA off-target search
5.2 years ago by i.sudbery 22k
4
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1
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5.1k
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Answer: A: Why does bioinformatics use a special format like a BAM file instead of a databa
5.2 years ago by i.sudbery 22k
1
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1
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.2 years ago by i.sudbery 22k
2
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0
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.3 years ago by i.sudbery 22k
8
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0
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8.1k
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Answer: A: How p value is calculated in GSEA?
5.3 years ago by i.sudbery 22k
1
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1
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3.3k
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Answer: A: Reliability of gene expression with low exonic counts in bulk RNA-seq data
5.3 years ago by i.sudbery 22k
0
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1
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8.1k
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Comment: C: How p value is calculated in GSEA?
5.3 years ago by i.sudbery 22k
1
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1
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.3 years ago by i.sudbery 22k
0
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0
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.3 years ago by i.sudbery 22k
1
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1
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.3 years ago by i.sudbery 22k
2
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0
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2.2k
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Comment: C: miRNA normalization workflow
5.3 years ago by i.sudbery 22k
1
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1
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1.5k
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Comment: C: Hypergeometric test on gene lists
5.3 years ago by i.sudbery 22k
0
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2
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1.4k
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Genotyping samples at a predetermined list of locations
SNP GATK Variants Genotyping
updated 5.3 years ago by ▴ 480 • written 5.3 years ago by 22k
2
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0
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13k
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Comment: C: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.3 years ago by i.sudbery 22k
3
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0
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5.2k
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Answer: A: file and directory management best practices
5.3 years ago by i.sudbery 22k
15
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2
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13k
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Answer: A: Am I crazy, or are most published RNA-seq studies vastly underpowered?
5.3 years ago by i.sudbery 22k
1
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0
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2.1k
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Answer: A: Genotype PCA from genotype matrix
5.3 years ago by i.sudbery 22k
5
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2
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2.1k
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Genotype PCA from genotype matrix
PCA SNP Genotype
5.3 years ago by i.sudbery 22k
5
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6
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2.2k
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RNAseq sample never as A in last base
RNA-Seq fastqc
updated 5.3 years ago by ▴ 20 • written 6.7 years ago by 22k
0
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0
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1.9k
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Comment: C: Assessing controls for RNASeq
5.3 years ago by i.sudbery 22k
0
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0
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1.9k
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Comment: C: Assessing controls for RNASeq
5.3 years ago by i.sudbery 22k
1
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1
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1.9k
views
Answer: A: Assessing controls for RNASeq
5.3 years ago by i.sudbery 22k
1
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0
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3.6k
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Comment: C: Annotation for gene-level analysis after stringtie
5.3 years ago by i.sudbery 22k
0
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1
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2.0k
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Comment: C: scRNAseq - DE
5.3 years ago by i.sudbery 22k
0
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1
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3.6k
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Comment: C: Annotation for gene-level analysis after stringtie
5.3 years ago by i.sudbery 22k
0
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1
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1.5k
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Comment: C: how to calculate p-value of Cuffdiff result?
5.3 years ago by i.sudbery 22k
0
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1
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1.2k
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Comment: C: RNA-Seq Star-Cuffdiff Pipeline error message after changing c parameter in cuffd
5.3 years ago by i.sudbery 22k
0
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1
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1.2k
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Answer: A: RNA-Seq Star-Cuffdiff Pipeline error message after changing c parameter in cuffd
5.3 years ago by i.sudbery 22k
1,728 results • Page 20 of 35
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