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Answer: Answer: Calling variants with UMI-collapsed duplex consensus reads
3 months ago by i.sudbery 19k
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1
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442
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Answer: Answer: UMI workflow resulting in bams with empty reads
3 months ago by i.sudbery 19k
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415
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Comment: Comment: How to fix DESeq2 Error in checkFullRank(modelMatrix)
3 months ago by i.sudbery 19k
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415
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Answer: Answer: How to fix DESeq2 Error in checkFullRank(modelMatrix)
3 months ago by i.sudbery 19k
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534
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Comment: Comment: How to predication/annotation trans-splicing in genome
3 months ago by i.sudbery 19k
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440
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Comment: Comment: Difference between mRNA and transcript record types in GFF3 and GTF
3 months ago by i.sudbery 19k
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440
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Comment: Comment: Difference between mRNA and transcript record types in GFF3 and GTF
3 months ago by i.sudbery 19k
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648
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Answer: Answer: Why employ normalization methods, and how can they be utilized in DEG analysis?
3 months ago by i.sudbery 19k
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258
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Answer: Answer: Is it possible to identify the strand of an RNA using UMI?
3 months ago by i.sudbery 19k
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615
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Comment: Comment: PCA plot interpretation (single population)
3 months ago by i.sudbery 19k
2
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848
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Comment: Comment: Tower Server configuration for NGS data analysis
3 months ago by i.sudbery 19k
2
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848
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Answer: Answer: Tower Server configuration for NGS data analysis
3 months ago by i.sudbery 19k
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427
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Comment: Comment: Why do I get DE non-polyadenylated genes in a RNAseq with PoliA library?
3 months ago by i.sudbery 19k
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263
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Answer: Answer: Differential Abundance between samples
3 months ago by i.sudbery 19k
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1.7k
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Answer: Answer: GOSeq gene ontology enrichment analysis in rice
3 months ago by i.sudbery 19k
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1.7k
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Comment: Comment: GOSeq gene ontology enrichment analysis in rice
3 months ago by i.sudbery 19k
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221
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Answer: Answer: Batch correction for eQTL analysis
3 months ago by i.sudbery 19k
6
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1
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1.0k
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Answer: Answer: How to overcome the imposter syndrome in bioinformatics?
3 months ago by i.sudbery 19k
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1.5k
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Answer: Answer: How to speed Salmon index up
3 months ago by i.sudbery 19k
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
2
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
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1
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
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0
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689
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Answer: Answer: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
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0
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689
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Comment: Comment: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
0
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1
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689
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Comment: Comment: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
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2
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689
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Comment: Comment: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
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2.1k
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Comment: Comment: Determining computer time required
4 months ago by i.sudbery 19k
1
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0
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2.1k
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Comment: Comment: Determining computer time required
4 months ago by i.sudbery 19k
1
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1
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2.1k
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Comment: Comment: Determining computer time required
updated 4 months ago by 43k • written 4 months ago by 19k
6
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2.1k
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Answer: Answer: Determining computer time required
4 months ago by i.sudbery 19k
0
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0
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830
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Comment: Comment: How to get enhancer regions
4 months ago by i.sudbery 19k
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0
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411
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Comment: Comment: isoformSwithAnalyzeR importRdata error
4 months ago by i.sudbery 19k
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2
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411
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Comment: Comment: isoformSwithAnalyzeR importRdata error
4 months ago by i.sudbery 19k
0
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0
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629
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Comment: Comment: Bulk RNA-seq: Different Expression Analysis with DEseq2
4 months ago by i.sudbery 19k
1
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0
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334
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Comment: Comment: Using Expression of a Gene as a Linear Regression Variable
4 months ago by i.sudbery 19k
1
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1
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906
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Answer: Answer: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
updated 4 months ago by 43k • written 4 months ago by 19k
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0
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906
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Comment: Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
4 months ago by i.sudbery 19k
1
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1
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546
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Comment: Comment: Differential expression analysis in a short gene list
4 months ago by i.sudbery 19k
2
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1
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559
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Comment: Comment: Question about identification of DEGs in paired sample using edgeR
4 months ago by i.sudbery 19k
4
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1
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546
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Answer: Answer: Differential expression analysis in a short gene list
4 months ago by i.sudbery 19k
2
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1
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559
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Answer: Answer: Question about identification of DEGs in paired sample using edgeR
4 months ago by i.sudbery 19k
2
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0
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2.1k
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Comment: Comment: First experiences matter
4 months ago by i.sudbery 19k
1
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2
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830
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Comment: Comment: How to get enhancer regions
4 months ago by i.sudbery 19k
2
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0
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721
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Comment: Comment: Log2 transformation is well used, but is there a good paper that can be used as
4 months ago by i.sudbery 19k
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0
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1.1k
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Comment: Comment: How to define the density (or something else) of B in the sequence, considering
4 months ago by i.sudbery 19k
3
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1
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540
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Comment: Comment: Doublechecking enrichment of promoters of DE genes
4 months ago by i.sudbery 19k
0
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0
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878
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Comment: Comment: installing DESeq2 on Windows
updated 4 months ago by 43k • written 4 months ago by 19k
1
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0
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598
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Answer: Answer: Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
updated 4 months ago by 43k • written 4 months ago by 19k
3
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1
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878
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Answer: Answer: installing DESeq2 on Windows
4 months ago by i.sudbery 19k
1
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0
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1.8k
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Comment: Comment: What apps can read large FASTQ files on Windows?
5 months ago by i.sudbery 19k
1,504 results • Page 2 of 31
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