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Comment: Comment: isoformSwithAnalyzeR importRdata error
4 months ago by i.sudbery 19k
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2
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412
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Comment: Comment: isoformSwithAnalyzeR importRdata error
4 months ago by i.sudbery 19k
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0
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629
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Comment: Comment: Bulk RNA-seq: Different Expression Analysis with DEseq2
4 months ago by i.sudbery 19k
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334
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Comment: Comment: Using Expression of a Gene as a Linear Regression Variable
4 months ago by i.sudbery 19k
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0
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908
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Comment: Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
4 months ago by i.sudbery 19k
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1
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549
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Comment: Comment: Differential expression analysis in a short gene list
4 months ago by i.sudbery 19k
2
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1
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560
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Comment: Comment: Question about identification of DEGs in paired sample using edgeR
4 months ago by i.sudbery 19k
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0
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2.1k
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Comment: Comment: First experiences matter
4 months ago by i.sudbery 19k
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2
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830
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Comment: Comment: How to get enhancer regions
4 months ago by i.sudbery 19k
2
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0
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723
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Comment: Comment: Log2 transformation is well used, but is there a good paper that can be used as
4 months ago by i.sudbery 19k
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0
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1.1k
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Comment: Comment: How to define the density (or something else) of B in the sequence, considering
4 months ago by i.sudbery 19k
3
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1
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540
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Comment: Comment: Doublechecking enrichment of promoters of DE genes
4 months ago by i.sudbery 19k
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0
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880
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Comment: Comment: installing DESeq2 on Windows
updated 4 months ago by 43k • written 4 months ago by 19k
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1.8k
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Comment: Comment: What apps can read large FASTQ files on Windows?
5 months ago by i.sudbery 19k
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0
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884
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Comment: Comment: p-value combination methods
5 months ago by i.sudbery 19k
1
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1
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884
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Comment: Comment: p-value combination methods
5 months ago by i.sudbery 19k
2
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1
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806
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Comment: Comment: Downstream analysis with DEseq2 normalization
5 months ago by i.sudbery 19k
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0
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927
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Comment: Comment: Command line or python RNA-seq read simulator
6 months ago by i.sudbery 19k
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0
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927
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Comment: Comment: Command line or python RNA-seq read simulator
6 months ago by i.sudbery 19k
0
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0
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927
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Comment: Comment: Command line or python RNA-seq read simulator
6 months ago by i.sudbery 19k
1
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1
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1.3k
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Comment: Comment: Is my data too noisy for DESeq? Should I model noise as unwanted variation?
6 months ago by i.sudbery 19k
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2
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927
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Comment: Comment: Command line or python RNA-seq read simulator
6 months ago by i.sudbery 19k
0
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1
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1.3k
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Comment: Comment: Is my data too noisy for DESeq? Should I model noise as unwanted variation?
6 months ago by i.sudbery 19k
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0
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552
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Comment: Comment: Cross validate RNA-seq and ATAC-seq
6 months ago by i.sudbery 19k
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0
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661
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Comment: Comment: Why my GWAS p-value QQ-plot is far above diagonal
7 months ago by i.sudbery 19k
1
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1
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651
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Comment: Comment: What is "intersectional genetic strategy"? How does it work? What can it do?
8 months ago by i.sudbery 19k
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0
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1.4k
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Comment: Comment: Formatting RNA-Seq Data for Kruskal Wallis Test on R
8 months ago by i.sudbery 19k
0
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0
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959
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Comment: Comment: Understaning the result of Meta-analysis of differential expression across datas
8 months ago by i.sudbery 19k
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1
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959
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Comment: Comment: Understaning the result of Meta-analysis of differential expression across datas
8 months ago by i.sudbery 19k
0
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1
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959
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Comment: Comment: Understaning the result of Meta-analysis of differential expression across datas
8 months ago by i.sudbery 19k
0
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1
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959
views
Comment: Comment: Understaning the result of Meta-analysis of differential expression across datas
8 months ago by i.sudbery 19k
1
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0
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1.8k
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Comment: Comment: UMI deduplication and output
9 months ago by i.sudbery 19k
1
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1
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874
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Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
9 months ago by i.sudbery 19k
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1
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874
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Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
9 months ago by i.sudbery 19k
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0
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1.0k
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Comment: Comment: Umi dedup with fastp
9 months ago by i.sudbery 19k
3
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1
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572
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Comment: Comment: Optimal Over Representation Analysis DE genes foldFC threshold?
9 months ago by i.sudbery 19k
0
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0
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1.2k
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Comment: Comment: losing many genes while doing DGE on the RNAseq data due to read count threshold
9 months ago by i.sudbery 19k
2
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0
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796
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Comment: Comment: correlation plot, FDR value
9 months ago by i.sudbery 19k
0
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1
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1.2k
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Comment: Comment: Is it possible to use salmon alevin tool for total rna seq samples?
10 months ago by i.sudbery 19k
1
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0
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1.0k
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Comment: Comment: Alignment of case vs. control from different origin
11 months ago by i.sudbery 19k
1
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2
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1.0k
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Comment: Comment: Alignment of case vs. control from different origin
11 months ago by i.sudbery 19k
1
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1
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1.0k
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Comment: Comment: Alignment of case vs. control from different origin
11 months ago by i.sudbery 19k
0
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0
replies
1.2k
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Comment: Comment: Design matrix to remove technical replicate effect
11 months ago by i.sudbery 19k
1
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0
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794
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Comment: Comment: Using t test to compare z-scores from RNA expression data
11 months ago by i.sudbery 19k
0
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0
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875
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Comment: Comment: Can I use umi_tools to discard cell barcodes and extract the UMI while keeping t
12 months ago by i.sudbery 19k
0
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2
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4.4k
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Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by i.sudbery 19k
0
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1
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4.4k
views
Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by i.sudbery 19k
0
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1
reply
4.4k
views
Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by i.sudbery 19k
0
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1
reply
4.4k
views
Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by i.sudbery 19k
1
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1
reply
4.4k
views
Comment: Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by i.sudbery 19k
913 results • Page 2 of 19
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